Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AL935212.3-201ENST00000450729 284 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.46□□□□□ -1.7
SHMT2P34897 ISCUP1-201ENST00000454451 448 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 RPS29P33-201ENST00000456717 146 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.46□□□□□ -1.7
SHMT2P34897 ATP5G1P3-201ENST00000463301 410 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 RPL7AP28-201ENST00000464513 571 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 AC105918.1-201ENST00000474399 838 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.46□□□□□ -1.7
SHMT2P34897 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.46□□□□□ -1.7
SHMT2P34897 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.46□□□□□ -1.7
SHMT2P34897 RN7SKP92-201ENST00000517266 244 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 AP002981.1-201ENST00000517692 975 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 GLRXP2-201ENST00000555594 321 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 AC209154.1-201ENST00000582156 337 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.46□□□□□ -1.7
SHMT2P34897 SLC25A36P1-201ENST00000590111 465 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.46□□□□□ -1.7
SHMT2P34897 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.46□□□□□ -1.7
SHMT2P34897 SNX18P1Y-201ENST00000616231 511 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 AP000346.3-201ENST00000622821 210 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 AC002044.3-201ENST00000623314 541 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.46□□□□□ -1.7
SHMT2P34897 OR51H2P-202ENST00000641424 3046 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SHMT2P34897 AC093535.2-201ENST00000624769 2326 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHMT2P34897 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SHMT2P34897 AP001002.1-201ENST00000625148 1513 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SHMT2P34897 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 AL592148.3-201ENST00000608771 2646 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 RNA5SP28-201ENST00000363841 119 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 AC004690.1-201ENST00000418216 328 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 HMGB1P32-201ENST00000425971 565 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 YWHAZP2-201ENST00000440317 728 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 CEACAMP9-201ENST00000442990 513 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 AC111000.3-201ENST00000508057 576 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.45□□□□□ -1.7
SHMT2P34897 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.45□□□□□ -1.7
SHMT2P34897 AP001781.1-201ENST00000530977 207 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.45□□□□□ -1.7
SHMT2P34897 AC018552.1-201ENST00000562099 811 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.45□□□□□ -1.7
SHMT2P34897 MIR4675-201ENST00000577898 77 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.45□□□□□ -1.7
SHMT2P34897 AC133552.5-201ENST00000604266 540 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.45□□□□□ -1.7
SHMT2P34897 AL136295.6-201ENST00000610486 658 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 AL133243.1-201ENST00000614487 366 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 AL391597.1-201ENST00000618707 694 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 MIR7703-201ENST00000620784 77 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.45□□□□□ -1.7
SHMT2P34897 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
SHMT2P34897 AL391684.1-202ENST00000641293 1636 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 AL355852.1-201ENST00000454081 1771 ntBASIC4.45□□□□□ -1.7
SHMT2P34897 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.45□□□□□ -1.7
SHMT2P34897 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHMT2P34897 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.44□□□□□ -1.7
SHMT2P34897 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHMT2P34897 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHMT2P34897 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SHMT2P34897 OR56B2P-202ENST00000641377 2453 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 AL592182.3-201ENST00000642132 3304 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.44□□□□□ -1.7
SHMT2P34897 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHMT2P34897 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
SHMT2P34897 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHMT2P34897 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SHMT2P34897 AC021146.4-201ENST00000309229 279 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 OR56B2P-201ENST00000317102 954 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SHMT2P34897 RNA5SP332-201ENST00000391063 115 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 Z74021.1-201ENST00000423610 407 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 TXNP2-201ENST00000443918 295 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHMT2P34897 NPM1P39-201ENST00000449818 867 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 HMGN1P8-201ENST00000463578 288 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 OR52A4P-201ENST00000472867 958 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 MTND3P6-201ENST00000485242 339 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.44□□□□□ -1.7
SHMT2P34897 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.44□□□□□ -1.7
SHMT2P34897 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
SHMT2P34897 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.44□□□□□ -1.7
SHMT2P34897 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.44□□□□□ -1.7
SHMT2P34897 CYCSP28-201ENST00000534284 321 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms