Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.49□□□□□ -1.53
CIITAP33076 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.49□□□□□ -1.53
CIITAP33076 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.49□□□□□ -1.53
CIITAP33076 RNU5A-7P-201ENST00000515979 116 ntBASIC5.49□□□□□ -1.53
CIITAP33076 IGHV3-63-201ENST00000518422 341 ntBASIC5.49□□□□□ -1.53
CIITAP33076 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.49□□□□□ -1.53
CIITAP33076 GLRXP2-201ENST00000555594 321 ntBASIC5.49□□□□□ -1.53
CIITAP33076 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.49□□□□□ -1.53
CIITAP33076 UBE2FP2-201ENST00000566646 462 ntBASIC5.49□□□□□ -1.53
CIITAP33076 RN7SL802P-201ENST00000577858 299 ntBASIC5.49□□□□□ -1.53
CIITAP33076 SNORA74C-1-201ENST00000580726 201 ntBASIC5.49□□□□□ -1.53
CIITAP33076 MIR3667-201ENST00000581025 74 ntBASIC5.49□□□□□ -1.53
CIITAP33076 AC022726.1-201ENST00000587475 207 ntBASIC5.49□□□□□ -1.53
CIITAP33076 AC006272.2-201ENST00000594725 163 ntBASIC5.49□□□□□ -1.53
CIITAP33076 AC084824.4-201ENST00000620106 731 ntBASIC5.49□□□□□ -1.53
CIITAP33076 FRG1DP-201ENST00000635586 771 ntBASIC5.49□□□□□ -1.53
CIITAP33076 OR6C71P-202ENST00000641886 1107 ntBASIC5.49□□□□□ -1.53
CIITAP33076 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.49□□□□□ -1.53
CIITAP33076 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CIITAP33076 AC073136.1-201ENST00000449426 2884 ntBASIC5.49□□□□□ -1.53
CIITAP33076 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CIITAP33076 HSPA8P14-201ENST00000552265 1805 ntBASIC5.48□□□□□ -1.53
CIITAP33076 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CIITAP33076 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CIITAP33076 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.48□□□□□ -1.53
CIITAP33076 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CIITAP33076 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CIITAP33076 TCP1P3-201ENST00000414406 1498 ntBASIC5.48□□□□□ -1.53
CIITAP33076 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CIITAP33076 AC017079.1-201ENST00000333650 415 ntBASIC5.48□□□□□ -1.53
CIITAP33076 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CIITAP33076 RPS3AP25-201ENST00000411660 793 ntBASIC5.48□□□□□ -1.53
CIITAP33076 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.48□□□□□ -1.53
CIITAP33076 NRBF2P3-201ENST00000432731 865 ntBASIC5.48□□□□□ -1.53
CIITAP33076 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.48□□□□□ -1.53
CIITAP33076 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.48□□□□□ -1.53
CIITAP33076 AC093716.1-201ENST00000435923 377 ntBASIC5.48□□□□□ -1.53
CIITAP33076 CYCSP11-201ENST00000436426 315 ntBASIC5.48□□□□□ -1.53
CIITAP33076 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.48□□□□□ -1.53
CIITAP33076 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.48□□□□□ -1.53
CIITAP33076 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.48□□□□□ -1.53
CIITAP33076 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.48□□□□□ -1.53
CIITAP33076 AL627224.1-201ENST00000448334 444 ntBASIC5.48□□□□□ -1.53
CIITAP33076 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.48□□□□□ -1.53
CIITAP33076 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.48□□□□□ -1.53
CIITAP33076 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.48□□□□□ -1.53
CIITAP33076 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.48□□□□□ -1.53
CIITAP33076 OR7H2P-201ENST00000513483 306 ntBASIC5.48□□□□□ -1.53
CIITAP33076 IGKV1-32-201ENST00000519290 311 ntBASIC5.48□□□□□ -1.53
CIITAP33076 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.48□□□□□ -1.53
CIITAP33076 MTATP6P24-201ENST00000576835 677 ntBASIC5.48□□□□□ -1.53
CIITAP33076 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.48□□□□□ -1.53
CIITAP33076 MIR5699-201ENST00000578903 90 ntBASIC5.48□□□□□ -1.53
CIITAP33076 AC091042.1-201ENST00000579213 173 ntBASIC5.48□□□□□ -1.53
CIITAP33076 AF230666.2-201ENST00000602328 725 ntBASIC5.48□□□□□ -1.53
CIITAP33076 AL512782.1-201ENST00000603093 364 ntBASIC5.48□□□□□ -1.53
CIITAP33076 AC112220.2-201ENST00000605513 533 ntBASIC5.48□□□□□ -1.53
CIITAP33076 AL096803.3-201ENST00000609032 532 ntBASIC5.48□□□□□ -1.53
CIITAP33076 AP001033.2-201ENST00000609701 1003 ntBASIC5.48□□□□□ -1.53
CIITAP33076 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.48□□□□□ -1.53
CIITAP33076 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CIITAP33076 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CIITAP33076 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CIITAP33076 SAMMSON-213ENST00000641336 1521 ntBASIC5.48□□□□□ -1.53
CIITAP33076 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CIITAP33076 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CIITAP33076 AC100778.3-201ENST00000580060 1750 ntBASIC5.47□□□□□ -1.53
CIITAP33076 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CIITAP33076 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CIITAP33076 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.47□□□□□ -1.53
CIITAP33076 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CIITAP33076 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CIITAP33076 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CIITAP33076 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.47□□□□□ -1.53
CIITAP33076 RNVU1-6-201ENST00000364688 164 ntBASIC5.47□□□□□ -1.53
CIITAP33076 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.47□□□□□ -1.53
CIITAP33076 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CIITAP33076 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.47□□□□□ -1.53
CIITAP33076 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CIITAP33076 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CIITAP33076 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.47□□□□□ -1.53
CIITAP33076 AL121878.1-201ENST00000418638 859 ntBASIC5.47□□□□□ -1.53
CIITAP33076 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.47□□□□□ -1.53
CIITAP33076 AL606495.1-201ENST00000422100 813 ntBASIC5.47□□□□□ -1.53
CIITAP33076 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.47□□□□□ -1.53
CIITAP33076 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.47□□□□□ -1.53
CIITAP33076 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.47□□□□□ -1.53
CIITAP33076 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.47□□□□□ -1.53
CIITAP33076 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.47□□□□□ -1.53
CIITAP33076 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.47□□□□□ -1.53
CIITAP33076 AC006466.1-201ENST00000438721 289 ntBASIC5.47□□□□□ -1.53
CIITAP33076 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.47□□□□□ -1.53
CIITAP33076 RPL36AP15-201ENST00000444514 266 ntBASIC5.47□□□□□ -1.53
CIITAP33076 AC010733.1-201ENST00000451515 401 ntBASIC5.47□□□□□ -1.53
CIITAP33076 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.47□□□□□ -1.53
CIITAP33076 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.47□□□□□ -1.53
CIITAP33076 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.47□□□□□ -1.53
CIITAP33076 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.47□□□□□ -1.53
CIITAP33076 Y_RNA.717-201ENST00000517106 92 ntBASIC5.47□□□□□ -1.53
CIITAP33076 RNU6-709P-201ENST00000517257 104 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms