Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DMBP28068 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DMBP28068 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DMBP28068 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DMBP28068 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DMBP28068 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 MIR192-201ENST00000384915 110 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 MIR298-201ENST00000401212 88 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 RPL5P19-201ENST00000404228 893 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 RPS16P5-201ENST00000406501 404 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 RPL23AP48-201ENST00000406913 488 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 CYCSP11-201ENST00000436426 315 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 H2AFZP5-201ENST00000446960 382 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 AL935212.3-201ENST00000450729 284 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 SCARNA10-201ENST00000459255 330 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 CCDC75P1-201ENST00000469247 791 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 AC006463.2-201ENST00000473326 348 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 AC008897.1-201ENST00000494006 347 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 AC111000.5-201ENST00000506559 1178 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 RN7SKP276-201ENST00000516242 268 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 AC090281.1-201ENST00000523019 276 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 AC105129.1-201ENST00000560250 297 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 SLC25A36P1-201ENST00000590111 465 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 AC103792.1-201ENST00000603591 919 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 AL121873.1-201ENST00000616013 524 ntBASIC3.47□□□□□ -1.85
HLA-DMBP28068 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DMBP28068 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DMBP28068 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DMBP28068 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DMBP28068 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DMBP28068 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DMBP28068 HCFC2P1-201ENST00000392864 1592 ntBASIC3.46□□□□□ -1.85
HLA-DMBP28068 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
HLA-DMBP28068 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC135352.1-201ENST00000506173 1418 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC093535.2-201ENST00000624769 2326 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DMBP28068 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DMBP28068 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 GCNT6-201ENST00000379591 934 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 HSPD1P16-201ENST00000402302 394 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 VDAC1P9-201ENST00000412766 841 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 AL590139.1-201ENST00000416267 400 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 VN1R31P-201ENST00000417498 730 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC019050.1-201ENST00000418508 492 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC140479.3-201ENST00000418944 1126 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC245028.1-201ENST00000423259 256 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DMBP28068 NRBF2P3-201ENST00000432731 865 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 AP000936.3-201ENST00000438127 255 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 RPS27AP15-201ENST00000447672 466 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AL162388.1-201ENST00000450912 352 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC010469.1-201ENST00000463864 576 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 IGLV2-34-201ENST00000490007 283 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 RPL36AP41-201ENST00000493820 306 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AK4P6-201ENST00000505168 528 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 NDUFB4P12-201ENST00000513465 390 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 HIGD1AP5-201ENST00000529959 259 ntBASIC3.46□□□□□ -1.86
HLA-DMBP28068 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DMBP28068 AL356121.2-201ENST00000624715 780 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms