Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.03□□□□□ -1.76
USF1P22415 AC073136.2-201ENST00000417282 849 ntBASIC4.03□□□□□ -1.76
USF1P22415 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.03□□□□□ -1.76
USF1P22415 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.03□□□□□ -1.76
USF1P22415 RPS27AP7-201ENST00000422792 455 ntBASIC4.03□□□□□ -1.76
USF1P22415 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.03□□□□□ -1.76
USF1P22415 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.03□□□□□ -1.76
USF1P22415 CCRL1P1-201ENST00000449542 1053 ntBASIC4.03□□□□□ -1.76
USF1P22415 AL691482.1-201ENST00000453255 87 ntBASIC4.03□□□□□ -1.76
USF1P22415 MTND2P28-201ENST00000457540 1044 ntBASIC4.03□□□□□ -1.76
USF1P22415 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.03□□□□□ -1.76
USF1P22415 RN7SL809P-201ENST00000482040 297 ntBASIC4.03□□□□□ -1.76
USF1P22415 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.03□□□□□ -1.76
USF1P22415 AC104971.1-201ENST00000495117 578 ntBASIC4.03□□□□□ -1.76
USF1P22415 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.03□□□□□ -1.76
USF1P22415 SCARNA22-201ENST00000503991 125 ntBASIC4.03□□□□□ -1.76
USF1P22415 RNA5SP249-201ENST00000516127 99 ntBASIC4.03□□□□□ -1.76
USF1P22415 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.03□□□□□ -1.76
USF1P22415 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.03□□□□□ -1.76
USF1P22415 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
USF1P22415 AL049874.4-201ENST00000557593 255 ntBASIC4.03□□□□□ -1.76
USF1P22415 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.03□□□□□ -1.76
USF1P22415 AC136624.4-201ENST00000573044 370 ntBASIC4.03□□□□□ -1.76
USF1P22415 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.03□□□□□ -1.76
USF1P22415 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.03□□□□□ -1.76
USF1P22415 RMST_5.1-201ENST00000618704 126 ntBASIC4.03□□□□□ -1.76
USF1P22415 AC068446.1-201ENST00000556425 1549 ntBASIC4.03□□□□□ -1.76
USF1P22415 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 AL450326.2-201ENST00000421913 1962 ntBASIC4.03□□□□□ -1.76
USF1P22415 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.03□□□□□ -1.77
USF1P22415 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
USF1P22415 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USF1P22415 AC091046.3-201ENST00000631455 1574 ntBASIC4.02□□□□□ -1.77
USF1P22415 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USF1P22415 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.02□□□□□ -1.77
USF1P22415 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.02□□□□□ -1.77
USF1P22415 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
USF1P22415 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USF1P22415 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.02□□□□□ -1.77
USF1P22415 AC006971.1-201ENST00000407916 4486 ntBASIC4.02□□□□□ -1.77
USF1P22415 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
USF1P22415 IGKV7-3-201ENST00000357453 298 ntBASIC4.02□□□□□ -1.77
USF1P22415 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USF1P22415 U3.30-201ENST00000391308 210 ntBASIC4.02□□□□□ -1.77
USF1P22415 AL034403.1-201ENST00000399414 885 ntBASIC4.02□□□□□ -1.77
USF1P22415 AL049693.1-201ENST00000402760 611 ntBASIC4.02□□□□□ -1.77
USF1P22415 AL049697.2-201ENST00000403708 294 ntBASIC4.02□□□□□ -1.77
USF1P22415 RN7SKP199-201ENST00000410325 305 ntBASIC4.02□□□□□ -1.77
USF1P22415 MTCYBP7-201ENST00000419540 1134 ntBASIC4.02□□□□□ -1.77
USF1P22415 GLUD1P9-201ENST00000420997 1173 ntBASIC4.02□□□□□ -1.77
USF1P22415 AC092162.1-201ENST00000432828 434 ntBASIC4.02□□□□□ -1.77
USF1P22415 SCAND3P1-201ENST00000439854 1060 ntBASIC4.02□□□□□ -1.77
USF1P22415 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.02□□□□□ -1.77
USF1P22415 AL162591.2-201ENST00000449634 317 ntBASIC4.02□□□□□ -1.77
USF1P22415 CEACAMP6-201ENST00000452007 574 ntBASIC4.02□□□□□ -1.77
USF1P22415 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.02□□□□□ -1.77
USF1P22415 HMGN1P8-201ENST00000463578 288 ntBASIC4.02□□□□□ -1.77
USF1P22415 OR52A4P-201ENST00000472867 958 ntBASIC4.02□□□□□ -1.77
USF1P22415 HAUS1P1-201ENST00000505275 832 ntBASIC4.02□□□□□ -1.77
USF1P22415 AC073358.1-201ENST00000505671 684 ntBASIC4.02□□□□□ -1.77
USF1P22415 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.02□□□□□ -1.77
USF1P22415 RNU1-6P-201ENST00000516290 144 ntBASIC4.02□□□□□ -1.77
USF1P22415 Y_RNA.719-201ENST00000517156 106 ntBASIC4.02□□□□□ -1.77
USF1P22415 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.02□□□□□ -1.77
USF1P22415 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.02□□□□□ -1.77
USF1P22415 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.02□□□□□ -1.77
USF1P22415 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.02□□□□□ -1.77
USF1P22415 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.02□□□□□ -1.77
USF1P22415 AC027281.1-201ENST00000574178 758 ntBASIC4.02□□□□□ -1.77
USF1P22415 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.02□□□□□ -1.77
USF1P22415 AC011453.2-201ENST00000603737 729 ntBASIC4.02□□□□□ -1.77
USF1P22415 AL121932.1-201ENST00000605542 214 ntBASIC4.02□□□□□ -1.77
USF1P22415 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
USF1P22415 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USF1P22415 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.02□□□□□ -1.77
USF1P22415 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.02□□□□□ -1.77
USF1P22415 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USF1P22415 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USF1P22415 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.02□□□□□ -1.77
USF1P22415 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.02□□□□□ -1.77
USF1P22415 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
USF1P22415 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
USF1P22415 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.02□□□□□ -1.77
USF1P22415 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
USF1P22415 AC108751.5-201ENST00000492880 1336 ntBASIC4.01□□□□□ -1.77
USF1P22415 CASC19-204ENST00000641001 2055 ntBASIC4.01□□□□□ -1.77
USF1P22415 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USF1P22415 AC008758.3-201ENST00000507003 1829 ntBASIC4.01□□□□□ -1.77
USF1P22415 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
USF1P22415 SNORD113.2-201ENST00000364166 89 ntBASIC4.01□□□□□ -1.77
USF1P22415 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.01□□□□□ -1.77
USF1P22415 AL590609.2-201ENST00000421430 368 ntBASIC4.01□□□□□ -1.77
USF1P22415 AC006065.1-201ENST00000422539 802 ntBASIC4.01□□□□□ -1.77
USF1P22415 FABP7P1-201ENST00000424004 391 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms