Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MTCYBP19-201ENST00000517463 1124 ntBASIC4.83□□□□□ -1.64
CDH3P22223 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH3P22223 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH3P22223 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH3P22223 AC018552.3-201ENST00000567416 561 ntBASIC4.83□□□□□ -1.64
CDH3P22223 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH3P22223 AC005242.1-201ENST00000585658 438 ntBASIC4.83□□□□□ -1.64
CDH3P22223 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH3P22223 ZNF92P2-201ENST00000600543 1059 ntBASIC4.83□□□□□ -1.64
CDH3P22223 AC084824.5-201ENST00000612009 413 ntBASIC4.83□□□□□ -1.64
CDH3P22223 AC100827.5-201ENST00000615883 426 ntBASIC4.83□□□□□ -1.64
CDH3P22223 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH3P22223 AC092159.4-201ENST00000624944 550 ntBASIC4.83□□□□□ -1.64
CDH3P22223 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH3P22223 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH3P22223 AC009229.4-201ENST00000623854 1947 ntBASIC4.83□□□□□ -1.64
CDH3P22223 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CDH3P22223 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.83□□□□□ -1.64
CDH3P22223 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH3P22223 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDH3P22223 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH3P22223 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH3P22223 IRF5P1-201ENST00000504852 2164 ntBASIC4.82□□□□□ -1.64
CDH3P22223 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH3P22223 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH3P22223 AC009313.2-201ENST00000417893 1941 ntBASIC4.82□□□□□ -1.64
CDH3P22223 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH3P22223 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH3P22223 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH3P22223 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH3P22223 AF186996.5-201ENST00000418098 904 ntBASIC4.82□□□□□ -1.64
CDH3P22223 ARL2BPP3-201ENST00000421226 480 ntBASIC4.82□□□□□ -1.64
CDH3P22223 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH3P22223 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH3P22223 RPS3AP53-201ENST00000454716 778 ntBASIC4.82□□□□□ -1.64
CDH3P22223 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH3P22223 RPL7AP28-201ENST00000464513 571 ntBASIC4.82□□□□□ -1.64
CDH3P22223 RPL5P30-201ENST00000465511 891 ntBASIC4.82□□□□□ -1.64
CDH3P22223 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH3P22223 RPL7P16-201ENST00000479738 738 ntBASIC4.82□□□□□ -1.64
CDH3P22223 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH3P22223 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH3P22223 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH3P22223 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.82□□□□□ -1.64
CDH3P22223 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH3P22223 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH3P22223 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH3P22223 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH3P22223 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH3P22223 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH3P22223 AC008033.2-201ENST00000542626 177 ntBASIC4.82□□□□□ -1.64
CDH3P22223 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH3P22223 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.82□□□□□ -1.64
CDH3P22223 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH3P22223 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.82□□□□□ -1.64
CDH3P22223 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.82□□□□□ -1.64
CDH3P22223 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH3P22223 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.82□□□□□ -1.64
CDH3P22223 AC005377.1-201ENST00000605126 456 ntBASIC4.82□□□□□ -1.64
CDH3P22223 AC116651.1-201ENST00000609724 556 ntBASIC4.82□□□□□ -1.64
CDH3P22223 AC006249.1-201ENST00000621223 471 ntBASIC4.82□□□□□ -1.64
CDH3P22223 AC019206.1-201ENST00000621938 425 ntBASIC4.82□□□□□ -1.64
CDH3P22223 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH3P22223 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH3P22223 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
CDH3P22223 A2MP1-204ENST00000566278 4130 ntBASIC4.82□□□□□ -1.64
CDH3P22223 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CDH3P22223 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH3P22223 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH3P22223 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH3P22223 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH3P22223 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH3P22223 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH3P22223 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH3P22223 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CDH3P22223 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH3P22223 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH3P22223 RN7SKP149-201ENST00000363008 344 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AL034403.1-201ENST00000399414 885 ntBASIC4.81□□□□□ -1.64
CDH3P22223 RN7SKP16-201ENST00000410180 299 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH3P22223 AC006065.1-201ENST00000422539 802 ntBASIC4.81□□□□□ -1.64
CDH3P22223 RPS6P14-201ENST00000425165 719 ntBASIC4.81□□□□□ -1.64
CDH3P22223 CYCSP11-201ENST00000436426 315 ntBASIC4.81□□□□□ -1.64
CDH3P22223 ELOCP3-201ENST00000439303 348 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH3P22223 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.81□□□□□ -1.64
CDH3P22223 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.81□□□□□ -1.64
CDH3P22223 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH3P22223 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH3P22223 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH3P22223 RPL31P44-201ENST00000447680 377 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH3P22223 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH3P22223 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH3P22223 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH3P22223 AL445433.1-201ENST00000457507 257 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AC005412.2-201ENST00000492004 341 ntBASIC4.81□□□□□ -1.64
CDH3P22223 RN7SL441P-201ENST00000492388 296 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms