Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.85□□□□□ -1.31
LIG1P18858 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
LIG1P18858 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
LIG1P18858 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
LIG1P18858 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 AC025470.1-201ENST00000510053 2032 ntBASIC6.85□□□□□ -1.31
LIG1P18858 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
LIG1P18858 Y_RNA.11-201ENST00000362375 109 ntBASIC6.85□□□□□ -1.31
LIG1P18858 RNY4P24-201ENST00000362735 96 ntBASIC6.85□□□□□ -1.31
LIG1P18858 RNY3P10-201ENST00000384764 102 ntBASIC6.85□□□□□ -1.31
LIG1P18858 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
LIG1P18858 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 RNA5SP80-201ENST00000410475 111 ntBASIC6.85□□□□□ -1.31
LIG1P18858 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.85□□□□□ -1.31
LIG1P18858 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.85□□□□□ -1.31
LIG1P18858 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 RPSAP40-201ENST00000442343 891 ntBASIC6.85□□□□□ -1.31
LIG1P18858 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.85□□□□□ -1.31
LIG1P18858 RPL5P7-201ENST00000444235 813 ntBASIC6.85□□□□□ -1.31
LIG1P18858 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.85□□□□□ -1.31
LIG1P18858 SSXP1-201ENST00000453640 473 ntBASIC6.85□□□□□ -1.31
LIG1P18858 PSAT1P4-201ENST00000466500 526 ntBASIC6.85□□□□□ -1.31
LIG1P18858 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.85□□□□□ -1.31
LIG1P18858 RPL23AP37-201ENST00000479658 549 ntBASIC6.85□□□□□ -1.31
LIG1P18858 HMGB1P36-201ENST00000487709 576 ntBASIC6.85□□□□□ -1.31
LIG1P18858 RN7SL284P-201ENST00000498823 275 ntBASIC6.85□□□□□ -1.31
LIG1P18858 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.85□□□□□ -1.31
LIG1P18858 RN7SKP35-201ENST00000517210 151 ntBASIC6.85□□□□□ -1.31
LIG1P18858 AC023632.1-201ENST00000518463 375 ntBASIC6.85□□□□□ -1.31
LIG1P18858 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.85□□□□□ -1.31
LIG1P18858 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.85□□□□□ -1.31
LIG1P18858 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.85□□□□□ -1.31
LIG1P18858 OR6C7P-201ENST00000547875 934 ntBASIC6.85□□□□□ -1.31
LIG1P18858 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.85□□□□□ -1.31
LIG1P18858 AC004825.1-201ENST00000555068 586 ntBASIC6.85□□□□□ -1.31
LIG1P18858 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.85□□□□□ -1.31
LIG1P18858 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.85□□□□□ -1.31
LIG1P18858 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.85□□□□□ -1.31
LIG1P18858 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.85□□□□□ -1.31
LIG1P18858 AC002310.3-201ENST00000569728 723 ntBASIC6.85□□□□□ -1.31
LIG1P18858 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.85□□□□□ -1.31
LIG1P18858 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
LIG1P18858 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.85□□□□□ -1.31
LIG1P18858 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.85□□□□□ -1.31
LIG1P18858 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC6.85□□□□□ -1.31
LIG1P18858 AC119501.1-201ENST00000603646 475 ntBASIC6.85□□□□□ -1.31
LIG1P18858 AP000238.1-201ENST00000608759 426 ntBASIC6.85□□□□□ -1.31
LIG1P18858 AC012360.2-201ENST00000609349 391 ntBASIC6.85□□□□□ -1.31
LIG1P18858 AC090517.2-201ENST00000614966 680 ntBASIC6.85□□□□□ -1.31
LIG1P18858 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.85□□□□□ -1.31
LIG1P18858 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.85□□□□□ -1.31
LIG1P18858 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.85□□□□□ -1.31
LIG1P18858 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.85□□□□□ -1.31
LIG1P18858 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
LIG1P18858 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
LIG1P18858 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.85□□□□□ -1.31
LIG1P18858 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
LIG1P18858 AL353743.4-201ENST00000422653 1547 ntBASIC6.85□□□□□ -1.31
LIG1P18858 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 AC130304.1-201ENST00000622942 2385 ntBASIC6.84□□□□□ -1.31
LIG1P18858 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 MRRFP1-201ENST00000435941 1675 ntBASIC6.84□□□□□ -1.31
LIG1P18858 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 AC011933.2-201ENST00000578539 2790 ntBASIC6.84□□□□□ -1.31
LIG1P18858 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
LIG1P18858 RNA5SP110-201ENST00000362638 115 ntBASIC6.84□□□□□ -1.31
LIG1P18858 RNU105B-201ENST00000364478 208 ntBASIC6.84□□□□□ -1.31
LIG1P18858 RPL21P108-201ENST00000413857 481 ntBASIC6.84□□□□□ -1.31
LIG1P18858 TCEA1P4-201ENST00000415066 844 ntBASIC6.84□□□□□ -1.31
LIG1P18858 AC245052.5-201ENST00000416320 649 ntBASIC6.84□□□□□ -1.31
LIG1P18858 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.84□□□□□ -1.31
LIG1P18858 AC007679.3-201ENST00000434035 414 ntBASIC6.84□□□□□ -1.31
LIG1P18858 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.84□□□□□ -1.31
LIG1P18858 AC110602.1-201ENST00000437414 318 ntBASIC6.84□□□□□ -1.31
LIG1P18858 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.84□□□□□ -1.31
LIG1P18858 SNRPEP8-201ENST00000442866 260 ntBASIC6.84□□□□□ -1.31
LIG1P18858 TCEA1P3-201ENST00000443005 880 ntBASIC6.84□□□□□ -1.31
LIG1P18858 AC079776.3-201ENST00000450665 370 ntBASIC6.84□□□□□ -1.31
LIG1P18858 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.84□□□□□ -1.31
LIG1P18858 AC098847.1-201ENST00000473094 348 ntBASIC6.84□□□□□ -1.31
LIG1P18858 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.84□□□□□ -1.31
LIG1P18858 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.84□□□□□ -1.31
LIG1P18858 AC090071.1-201ENST00000507713 644 ntBASIC6.84□□□□□ -1.31
LIG1P18858 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.84□□□□□ -1.31
LIG1P18858 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.84□□□□□ -1.31
LIG1P18858 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.84□□□□□ -1.31
LIG1P18858 AC036111.2-201ENST00000533247 901 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms