Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
ITGA4P13612 DCAF13P3-201ENST00000561147 1334 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ITGA4P13612 Y_RNA.408-201ENST00000383987 102 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 RNU6-98P-201ENST00000384173 107 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 MIR143-201ENST00000385300 106 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 ATP5F1P4-201ENST00000397288 746 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 AL161449.1-201ENST00000414531 1199 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 Z99497.1-201ENST00000421282 135 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 RPL23AP4-201ENST00000427757 463 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.32□□□□□ -1.4
ITGA4P13612 EEF1B2P6-201ENST00000445713 673 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 IGBP1P3-201ENST00000447449 1000 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 DDX39BP2-208ENST00000453923 258 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.32□□□□□ -1.4
ITGA4P13612 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC6.32□□□□□ -1.4
ITGA4P13612 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.32□□□□□ -1.4
ITGA4P13612 DYNLL1P6-201ENST00000503440 264 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ITGA4P13612 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.32□□□□□ -1.4
ITGA4P13612 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.32□□□□□ -1.4
ITGA4P13612 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.32□□□□□ -1.4
ITGA4P13612 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.32□□□□□ -1.4
ITGA4P13612 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.32□□□□□ -1.4
ITGA4P13612 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.32□□□□□ -1.4
ITGA4P13612 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC6.32□□□□□ -1.4
ITGA4P13612 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.32□□□□□ -1.4
ITGA4P13612 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.32□□□□□ -1.4
ITGA4P13612 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.32□□□□□ -1.4
ITGA4P13612 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.32□□□□□ -1.4
ITGA4P13612 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.32□□□□□ -1.4
ITGA4P13612 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.32□□□□□ -1.4
ITGA4P13612 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.32□□□□□ -1.4
ITGA4P13612 FO393422.1-201ENST00000603908 708 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ITGA4P13612 AC135068.5-201ENST00000624197 983 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ITGA4P13612 MRRFP1-201ENST00000435941 1675 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 AC090220.1-201ENST00000593078 1699 ntBASIC6.32□□□□□ -1.4
ITGA4P13612 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ITGA4P13612 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
ITGA4P13612 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ITGA4P13612 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
ITGA4P13612 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.32□□□□□ -1.4
ITGA4P13612 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
ITGA4P13612 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.32□□□□□ -1.4
ITGA4P13612 MT-RNR2-201ENST00000387347 1559 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ITGA4P13612 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ITGA4P13612 AL353743.4-201ENST00000422653 1547 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.31□□□□□ -1.4
ITGA4P13612 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.31□□□□□ -1.4
ITGA4P13612 U3.10-201ENST00000364459 214 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
ITGA4P13612 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
ITGA4P13612 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.31□□□□□ -1.4
ITGA4P13612 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.31□□□□□ -1.4
ITGA4P13612 RNA5SP498-201ENST00000411342 120 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 RPS21P8-201ENST00000413365 247 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.31□□□□□ -1.4
ITGA4P13612 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC6.31□□□□□ -1.4
ITGA4P13612 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.31□□□□□ -1.4
ITGA4P13612 PTP4A1P1-201ENST00000420539 515 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.31□□□□□ -1.4
ITGA4P13612 OR2B8P-201ENST00000432841 938 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 KRT8P51-201ENST00000438938 274 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.31□□□□□ -1.4
ITGA4P13612 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.31□□□□□ -1.4
ITGA4P13612 AL606490.1-201ENST00000452266 765 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.31□□□□□ -1.4
ITGA4P13612 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC6.31□□□□□ -1.4
ITGA4P13612 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.31□□□□□ -1.4
ITGA4P13612 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ITGA4P13612 RPL38P3-201ENST00000484463 213 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 RN7SL214P-201ENST00000487317 265 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 RNA5SP362-201ENST00000516048 118 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 RNU6-615P-201ENST00000516065 106 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 MIR2117-201ENST00000516780 80 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.31□□□□□ -1.4
ITGA4P13612 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.31□□□□□ -1.4
ITGA4P13612 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ITGA4P13612 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ITGA4P13612 AC245505.1-201ENST00000556398 224 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.31□□□□□ -1.4
ITGA4P13612 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.31□□□□□ -1.4
ITGA4P13612 AGGF1P8-201ENST00000562979 1000 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.31□□□□□ -1.4
ITGA4P13612 AC008507.1-201ENST00000587506 734 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 EIF1P6-201ENST00000600054 334 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 AL589674.2-201ENST00000604304 337 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 AC104695.2-201ENST00000605056 775 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 AC092354.1-201ENST00000606057 376 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.31□□□□□ -1.4
ITGA4P13612 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.31□□□□□ -1.4
ITGA4P13612 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ITGA4P13612 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ITGA4P13612 SAMMSON-209ENST00000641222 1100 ntBASIC6.31□□□□□ -1.4
ITGA4P13612 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
ITGA4P13612 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.31□□□□□ -1.4
ITGA4P13612 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms