Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MIR6875-201ENST00000617506 72 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL11A1P12107 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.86□□□□□ -1.63
COL11A1P12107 AL672167.1-205ENST00000641112 3080 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL11A1P12107 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL11A1P12107 AC116667.1-201ENST00000604855 2072 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL11A1P12107 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL11A1P12107 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL11A1P12107 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.86□□□□□ -1.63
COL11A1P12107 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL11A1P12107 AL079305.1-201ENST00000623159 3008 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL11A1P12107 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.86□□□□□ -1.63
COL11A1P12107 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.86□□□□□ -1.63
COL11A1P12107 CEACAMP1-201ENST00000434624 1035 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 VN1R34P-201ENST00000447387 883 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 AL162151.2-201ENST00000448875 158 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 snoU13.22-201ENST00000459428 104 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 RN7SL132P-201ENST00000478131 296 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.86□□□□□ -1.63
COL11A1P12107 SAP18P1-201ENST00000512058 390 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.86□□□□□ -1.63
COL11A1P12107 AL161729.3-201ENST00000603533 673 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
COL11A1P12107 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL11A1P12107 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
COL11A1P12107 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL11A1P12107 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL11A1P12107 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL11A1P12107 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL11A1P12107 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL11A1P12107 RLIMP1-201ENST00000339626 1680 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
COL11A1P12107 MAPK10-286ENST00000641208 8747 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL11A1P12107 MIR208A-201ENST00000362287 71 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 RNU1-44P-201ENST00000384453 163 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 MIR554-201ENST00000384874 96 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.85□□□□□ -1.63
COL11A1P12107 CEACAMP8-201ENST00000413902 580 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.85□□□□□ -1.63
COL11A1P12107 OR13Z1P-201ENST00000416141 834 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 AC108032.1-201ENST00000416706 207 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.85□□□□□ -1.63
COL11A1P12107 RPL23AP83-201ENST00000434984 473 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 SETP4-201ENST00000455717 868 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 OR8R1P-201ENST00000543943 764 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL11A1P12107 LSM3P2-201ENST00000551246 273 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.85□□□□□ -1.63
COL11A1P12107 CDRT1-208ENST00000630868 794 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 TMEM30CP-203ENST00000637814 1035 ntBASIC4.85□□□□□ -1.63
COL11A1P12107 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL11A1P12107 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.85□□□□□ -1.63
COL11A1P12107 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL11A1P12107 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL11A1P12107 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL11A1P12107 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL11A1P12107 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.85□□□□□ -1.63
COL11A1P12107 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
COL11A1P12107 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL11A1P12107 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL11A1P12107 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL11A1P12107 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
COL11A1P12107 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL11A1P12107 EIF3EP2-201ENST00000423042 1814 ntBASIC4.84□□□□□ -1.63
COL11A1P12107 MIR1911-201ENST00000410783 80 ntBASIC4.84□□□□□ -1.63
COL11A1P12107 RPL36AP10-201ENST00000421785 322 ntBASIC4.84□□□□□ -1.63
COL11A1P12107 RPS27AP15-201ENST00000447672 466 ntBASIC4.84□□□□□ -1.63
COL11A1P12107 TPT1P1-201ENST00000458495 518 ntBASIC4.84□□□□□ -1.63
COL11A1P12107 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.84□□□□□ -1.63
COL11A1P12107 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.84□□□□□ -1.63
COL11A1P12107 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.84□□□□□ -1.63
COL11A1P12107 TVP23BP1-201ENST00000557500 617 ntBASIC4.84□□□□□ -1.63
COL11A1P12107 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.84□□□□□ -1.63
COL11A1P12107 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.84□□□□□ -1.63
COL11A1P12107 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL11A1P12107 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL11A1P12107 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL11A1P12107 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.84□□□□□ -1.64
COL11A1P12107 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
COL11A1P12107 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.84□□□□□ -1.64
COL11A1P12107 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
COL11A1P12107 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.84□□□□□ -1.64
COL11A1P12107 AC017104.4-201ENST00000636283 1592 ntBASIC4.84□□□□□ -1.64
COL11A1P12107 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
COL11A1P12107 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
COL11A1P12107 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.83□□□□□ -1.64
COL11A1P12107 RNU1-20P-201ENST00000363314 162 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 AP000357.1-201ENST00000409926 1165 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 RNU6-628P-201ENST00000410675 107 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 AL358472.1-201ENST00000431295 329 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.83□□□□□ -1.64
COL11A1P12107 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.83□□□□□ -1.64
COL11A1P12107 AC110743.1-201ENST00000584870 478 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.83□□□□□ -1.64
COL11A1P12107 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms