Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.61□□□□□ -1.83
CD28P10747 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC3.61□□□□□ -1.83
CD28P10747 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.61□□□□□ -1.83
CD28P10747 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.61□□□□□ -1.83
CD28P10747 AC007016.1-201ENST00000512110 244 ntBASIC3.61□□□□□ -1.83
CD28P10747 RNA5SP249-201ENST00000516127 99 ntBASIC3.61□□□□□ -1.83
CD28P10747 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CD28P10747 TOMM20P2-201ENST00000540082 421 ntBASIC3.61□□□□□ -1.83
CD28P10747 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.61□□□□□ -1.83
CD28P10747 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.61□□□□□ -1.83
CD28P10747 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.61□□□□□ -1.83
CD28P10747 FKBP1BP1-201ENST00000553366 325 ntBASIC3.61□□□□□ -1.83
CD28P10747 AC068831.4-201ENST00000556118 109 ntBASIC3.61□□□□□ -1.83
CD28P10747 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.61□□□□□ -1.83
CD28P10747 AC087477.6-201ENST00000559595 843 ntBASIC3.61□□□□□ -1.83
CD28P10747 AC136624.4-201ENST00000573044 370 ntBASIC3.61□□□□□ -1.83
CD28P10747 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CD28P10747 FAM60CP-201ENST00000591086 664 ntBASIC3.61□□□□□ -1.83
CD28P10747 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.61□□□□□ -1.83
CD28P10747 AL035461.2-201ENST00000619201 524 ntBASIC3.61□□□□□ -1.83
CD28P10747 AP001005.3-201ENST00000622049 129 ntBASIC3.61□□□□□ -1.83
CD28P10747 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.61□□□□□ -1.83
CD28P10747 AC011815.3-201ENST00000624194 473 ntBASIC3.61□□□□□ -1.83
CD28P10747 AC011944.2-201ENST00000624440 683 ntBASIC3.61□□□□□ -1.83
CD28P10747 AC006453.5-201ENST00000636451 619 ntBASIC3.61□□□□□ -1.83
CD28P10747 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CD28P10747 AC092435.4-201ENST00000623012 4159 ntBASIC3.61□□□□□ -1.83
CD28P10747 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.61□□□□□ -1.83
CD28P10747 AC005332.5-201ENST00000591222 2919 ntBASIC3.61□□□□□ -1.83
CD28P10747 ZFRP1-201ENST00000457579 2970 ntBASIC3.61□□□□□ -1.83
CD28P10747 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.61□□□□□ -1.83
CD28P10747 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.61□□□□□ -1.83
CD28P10747 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CD28P10747 MFSD8-220ENST00000641243 1422 ntBASIC3.61□□□□□ -1.83
CD28P10747 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.61□□□□□ -1.83
CD28P10747 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CD28P10747 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.6□□□□□ -1.83
CD28P10747 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.6□□□□□ -1.83
CD28P10747 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CD28P10747 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CD28P10747 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.6□□□□□ -1.83
CD28P10747 AC021146.4-201ENST00000309229 279 ntBASIC3.6□□□□□ -1.83
CD28P10747 MIR365B-201ENST00000362317 111 ntBASIC3.6□□□□□ -1.83
CD28P10747 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.6□□□□□ -1.83
CD28P10747 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CD28P10747 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CD28P10747 OR1F12-201ENST00000402365 945 ntBASIC3.6□□□□□ -1.83
CD28P10747 AL359643.1-201ENST00000404109 423 ntBASIC3.6□□□□□ -1.83
CD28P10747 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.6□□□□□ -1.83
CD28P10747 OR51B3P-201ENST00000412287 913 ntBASIC3.6□□□□□ -1.83
CD28P10747 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.6□□□□□ -1.83
CD28P10747 E2F6P2-201ENST00000420708 748 ntBASIC3.6□□□□□ -1.83
CD28P10747 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
CD28P10747 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.6□□□□□ -1.83
CD28P10747 AL450263.2-201ENST00000439400 589 ntBASIC3.6□□□□□ -1.83
CD28P10747 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.6□□□□□ -1.83
CD28P10747 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.6□□□□□ -1.83
CD28P10747 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.6□□□□□ -1.83
CD28P10747 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.6□□□□□ -1.83
CD28P10747 AC025674.1-201ENST00000507074 324 ntBASIC3.6□□□□□ -1.83
CD28P10747 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.6□□□□□ -1.83
CD28P10747 AC008676.3-201ENST00000521237 435 ntBASIC3.6□□□□□ -1.83
CD28P10747 RPL23AP53-201ENST00000521854 457 ntBASIC3.6□□□□□ -1.83
CD28P10747 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.6□□□□□ -1.83
CD28P10747 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CD28P10747 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.6□□□□□ -1.83
CD28P10747 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 AL049830.4-201ENST00000555149 351 ntBASIC3.6□□□□□ -1.83
CD28P10747 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.6□□□□□ -1.83
CD28P10747 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.6□□□□□ -1.83
CD28P10747 CD24P2-201ENST00000565486 219 ntBASIC3.6□□□□□ -1.83
CD28P10747 FAM106CP-201ENST00000582212 507 ntBASIC3.6□□□□□ -1.83
CD28P10747 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.6□□□□□ -1.83
CD28P10747 AC117490.2-201ENST00000610042 594 ntBASIC3.6□□□□□ -1.83
CD28P10747 AC005962.2-201ENST00000611427 652 ntBASIC3.6□□□□□ -1.83
CD28P10747 AC022106.2-201ENST00000620114 757 ntBASIC3.6□□□□□ -1.83
CD28P10747 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.6□□□□□ -1.83
CD28P10747 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 DDX18P5-201ENST00000534547 1306 ntBASIC3.6□□□□□ -1.83
CD28P10747 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CD28P10747 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD28P10747 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CD28P10747 UGT2B26P-201ENST00000508672 1613 ntBASIC3.59□□□□□ -1.83
CD28P10747 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CD28P10747 CCT8P1-201ENST00000413611 1657 ntBASIC3.59□□□□□ -1.83
CD28P10747 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CD28P10747 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms