Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.93□□□□□ -1.62
TPM1P09493 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.93□□□□□ -1.62
TPM1P09493 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.93□□□□□ -1.62
TPM1P09493 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.93□□□□□ -1.62
TPM1P09493 AC010201.1-201ENST00000605051 540 ntBASIC4.93□□□□□ -1.62
TPM1P09493 AL031666.3-201ENST00000609320 1006 ntBASIC4.93□□□□□ -1.62
TPM1P09493 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TPM1P09493 AC007546.2-201ENST00000623996 360 ntBASIC4.93□□□□□ -1.62
TPM1P09493 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.93□□□□□ -1.62
TPM1P09493 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.93□□□□□ -1.62
TPM1P09493 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
TPM1P09493 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
TPM1P09493 ZNF137P-201ENST00000456718 1920 ntBASIC4.93□□□□□ -1.62
TPM1P09493 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TPM1P09493 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TPM1P09493 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TPM1P09493 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.92□□□□□ -1.62
TPM1P09493 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TPM1P09493 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TPM1P09493 AC010329.2-201ENST00000595195 2737 ntBASIC4.92□□□□□ -1.62
TPM1P09493 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TPM1P09493 AL451142.2-201ENST00000429076 2090 ntBASIC4.92□□□□□ -1.62
TPM1P09493 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TPM1P09493 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.92□□□□□ -1.62
TPM1P09493 RNA5SP307-201ENST00000362863 116 ntBASIC4.92□□□□□ -1.62
TPM1P09493 RN7SKP15-201ENST00000364742 309 ntBASIC4.92□□□□□ -1.62
TPM1P09493 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TPM1P09493 SDHCP2-201ENST00000398565 501 ntBASIC4.92□□□□□ -1.62
TPM1P09493 RN7SKP167-201ENST00000411047 285 ntBASIC4.92□□□□□ -1.62
TPM1P09493 RPS23P10-201ENST00000416185 486 ntBASIC4.92□□□□□ -1.62
TPM1P09493 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TPM1P09493 MTND4LP13-201ENST00000425022 298 ntBASIC4.92□□□□□ -1.62
TPM1P09493 AC007559.1-201ENST00000428736 355 ntBASIC4.92□□□□□ -1.62
TPM1P09493 CDY14P-201ENST00000431260 1014 ntBASIC4.92□□□□□ -1.62
TPM1P09493 NRBF2P3-201ENST00000432731 865 ntBASIC4.92□□□□□ -1.62
TPM1P09493 AC016831.4-201ENST00000438302 307 ntBASIC4.92□□□□□ -1.62
TPM1P09493 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.92□□□□□ -1.62
TPM1P09493 CDY12P-201ENST00000440679 1015 ntBASIC4.92□□□□□ -1.62
TPM1P09493 AL391987.1-201ENST00000441025 200 ntBASIC4.92□□□□□ -1.62
TPM1P09493 CDY13P-201ENST00000445813 1015 ntBASIC4.92□□□□□ -1.62
TPM1P09493 OR52J1P-201ENST00000450596 932 ntBASIC4.92□□□□□ -1.62
TPM1P09493 CDY23P-201ENST00000451661 1014 ntBASIC4.92□□□□□ -1.62
TPM1P09493 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.92□□□□□ -1.62
TPM1P09493 AC144530.1-201ENST00000452862 555 ntBASIC4.92□□□□□ -1.62
TPM1P09493 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.92□□□□□ -1.62
TPM1P09493 BX284632.1-201ENST00000478218 541 ntBASIC4.92□□□□□ -1.62
TPM1P09493 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.92□□□□□ -1.62
TPM1P09493 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.92□□□□□ -1.62
TPM1P09493 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.92□□□□□ -1.62
TPM1P09493 RNA5SP497-201ENST00000516081 97 ntBASIC4.92□□□□□ -1.62
TPM1P09493 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.92□□□□□ -1.62
TPM1P09493 AC109635.6-201ENST00000525487 1113 ntBASIC4.92□□□□□ -1.62
TPM1P09493 UBTFL9-201ENST00000534504 1148 ntBASIC4.92□□□□□ -1.62
TPM1P09493 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.92□□□□□ -1.62
TPM1P09493 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.92□□□□□ -1.62
TPM1P09493 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.92□□□□□ -1.62
TPM1P09493 MIR1269B-201ENST00000580405 75 ntBASIC4.92□□□□□ -1.62
TPM1P09493 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.92□□□□□ -1.62
TPM1P09493 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.92□□□□□ -1.62
TPM1P09493 AC087763.1-201ENST00000603391 286 ntBASIC4.92□□□□□ -1.62
TPM1P09493 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.92□□□□□ -1.62
TPM1P09493 AP002799.1-201ENST00000623552 423 ntBASIC4.92□□□□□ -1.62
TPM1P09493 BMS1P21-201ENST00000634565 365 ntBASIC4.92□□□□□ -1.62
TPM1P09493 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.92□□□□□ -1.62
TPM1P09493 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TPM1P09493 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TPM1P09493 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TPM1P09493 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.91□□□□□ -1.62
TPM1P09493 IQCB2P-201ENST00000401788 1633 ntBASIC4.91□□□□□ -1.62
TPM1P09493 U8.4-201ENST00000363626 134 ntBASIC4.91□□□□□ -1.62
TPM1P09493 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.91□□□□□ -1.62
TPM1P09493 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TPM1P09493 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TPM1P09493 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.91□□□□□ -1.62
TPM1P09493 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.91□□□□□ -1.62
TPM1P09493 RAD23BP1-201ENST00000421404 1227 ntBASIC4.91□□□□□ -1.62
TPM1P09493 CHEK2P5-201ENST00000423877 246 ntBASIC4.91□□□□□ -1.62
TPM1P09493 AL158073.1-201ENST00000426848 1104 ntBASIC4.91□□□□□ -1.62
TPM1P09493 RPS12P10-201ENST00000427031 377 ntBASIC4.91□□□□□ -1.62
TPM1P09493 TRY2P-201ENST00000448860 689 ntBASIC4.91□□□□□ -1.62
TPM1P09493 AC108463.1-201ENST00000450258 347 ntBASIC4.91□□□□□ -1.62
TPM1P09493 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.91□□□□□ -1.62
TPM1P09493 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.91□□□□□ -1.62
TPM1P09493 RNU2-30P-201ENST00000516209 141 ntBASIC4.91□□□□□ -1.62
TPM1P09493 IGLVIV-64-201ENST00000518581 301 ntBASIC4.91□□□□□ -1.62
TPM1P09493 OR8X1P-201ENST00000534542 869 ntBASIC4.91□□□□□ -1.62
TPM1P09493 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.91□□□□□ -1.62
TPM1P09493 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.91□□□□□ -1.62
TPM1P09493 HMGB3P26-201ENST00000560051 582 ntBASIC4.91□□□□□ -1.62
TPM1P09493 AC124068.1-201ENST00000563131 678 ntBASIC4.91□□□□□ -1.62
TPM1P09493 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.91□□□□□ -1.62
TPM1P09493 AC008536.1-201ENST00000602872 669 ntBASIC4.91□□□□□ -1.62
TPM1P09493 SUMO2P15-201ENST00000604285 278 ntBASIC4.91□□□□□ -1.62
TPM1P09493 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.91□□□□□ -1.62
TPM1P09493 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.91□□□□□ -1.62
TPM1P09493 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TPM1P09493 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TPM1P09493 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TPM1P09493 KARSP3-201ENST00000571212 1504 ntBASIC4.91□□□□□ -1.62
TPM1P09493 AP000756.2-201ENST00000624168 2567 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms