Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL160290.3-201ENST00000604869 165 ntBASIC5.66□□□□□ -1.5
COL5A2P05997 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.66□□□□□ -1.5
COL5A2P05997 MIR6500-201ENST00000622700 86 ntBASIC5.66□□□□□ -1.5
COL5A2P05997 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL5A2P05997 CFTRP2-201ENST00000634304 199 ntBASIC5.66□□□□□ -1.5
COL5A2P05997 AC099654.11-201ENST00000638857 294 ntBASIC5.66□□□□□ -1.5
COL5A2P05997 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL5A2P05997 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.66□□□□□ -1.5
COL5A2P05997 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL5A2P05997 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL5A2P05997 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL5A2P05997 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL5A2P05997 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL5A2P05997 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL5A2P05997 AP001157.1-201ENST00000550837 2339 ntBASIC5.66□□□□□ -1.5
COL5A2P05997 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL5A2P05997 OR56B2P-201ENST00000317102 954 ntBASIC5.65□□□□□ -1.5
COL5A2P05997 CDY14P-201ENST00000431260 1014 ntBASIC5.65□□□□□ -1.5
COL5A2P05997 NMNAT1P2-201ENST00000435192 860 ntBASIC5.65□□□□□ -1.5
COL5A2P05997 CDY12P-201ENST00000440679 1015 ntBASIC5.65□□□□□ -1.5
COL5A2P05997 CDY13P-201ENST00000445813 1015 ntBASIC5.65□□□□□ -1.5
COL5A2P05997 AL157884.3-201ENST00000448273 1184 ntBASIC5.65□□□□□ -1.5
COL5A2P05997 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.65□□□□□ -1.5
COL5A2P05997 CDY23P-201ENST00000451661 1014 ntBASIC5.65□□□□□ -1.5
COL5A2P05997 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.65□□□□□ -1.5
COL5A2P05997 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.65□□□□□ -1.5
COL5A2P05997 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.65□□□□□ -1.5
COL5A2P05997 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.65□□□□□ -1.5
COL5A2P05997 AC112230.1-201ENST00000604342 547 ntBASIC5.65□□□□□ -1.5
COL5A2P05997 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
COL5A2P05997 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL5A2P05997 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL5A2P05997 CASC19-261ENST00000641853 1638 ntBASIC5.65□□□□□ -1.51
COL5A2P05997 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL5A2P05997 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A2P05997 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.64□□□□□ -1.51
COL5A2P05997 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL5A2P05997 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A2P05997 RPL5P2-201ENST00000429598 854 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 TCEA1P3-201ENST00000443005 880 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 RPL23AP81-201ENST00000455252 467 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 AC128716.1-201ENST00000475129 166 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 AF213884.1-201ENST00000488102 463 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.64□□□□□ -1.51
COL5A2P05997 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.64□□□□□ -1.51
COL5A2P05997 IGKV2-23-201ENST00000518729 323 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.64□□□□□ -1.51
COL5A2P05997 RN7SL339P-201ENST00000580597 296 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 AC005034.4-201ENST00000603612 899 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 AC007546.2-201ENST00000623996 360 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.64□□□□□ -1.51
COL5A2P05997 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
COL5A2P05997 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.64□□□□□ -1.51
COL5A2P05997 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A2P05997 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.64□□□□□ -1.51
COL5A2P05997 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL5A2P05997 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.64□□□□□ -1.51
COL5A2P05997 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.64□□□□□ -1.51
COL5A2P05997 VPS35P1-201ENST00000563400 1518 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 SNORA73.2-201ENST00000364946 201 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 AL691449.1-201ENST00000426570 421 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A2P05997 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.64□□□□□ -1.51
COL5A2P05997 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.64□□□□□ -1.51
COL5A2P05997 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.64□□□□□ -1.51
COL5A2P05997 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.64□□□□□ -1.51
COL5A2P05997 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A2P05997 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL5A2P05997 RPL23AP97-201ENST00000568955 471 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.64□□□□□ -1.51
COL5A2P05997 AC107982.3-201ENST00000584957 985 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 Z98200.1-201ENST00000607298 470 ntBASIC5.64□□□□□ -1.51
COL5A2P05997 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A2P05997 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COL5A2P05997 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A2P05997 FAM91A3P-201ENST00000456826 2544 ntBASIC5.63□□□□□ -1.51
COL5A2P05997 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
COL5A2P05997 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.63□□□□□ -1.51
COL5A2P05997 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A2P05997 RNA5SP119-201ENST00000362715 117 ntBASIC5.63□□□□□ -1.51
COL5A2P05997 NOTCH2P1-201ENST00000443481 624 ntBASIC5.63□□□□□ -1.51
COL5A2P05997 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.63□□□□□ -1.51
COL5A2P05997 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.63□□□□□ -1.51
COL5A2P05997 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.63□□□□□ -1.51
COL5A2P05997 AC007688.1-201ENST00000475592 759 ntBASIC5.63□□□□□ -1.51
COL5A2P05997 DSTNP2-201ENST00000504533 515 ntBASIC5.63□□□□□ -1.51
COL5A2P05997 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.63□□□□□ -1.51
COL5A2P05997 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.63□□□□□ -1.51
COL5A2P05997 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.63□□□□□ -1.51
COL5A2P05997 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.63□□□□□ -1.51
COL5A2P05997 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.63□□□□□ -1.51
COL5A2P05997 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.63□□□□□ -1.51
COL5A2P05997 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.63□□□□□ -1.51
COL5A2P05997 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.63□□□□□ -1.51
COL5A2P05997 SNORA51-201ENST00000606420 132 ntBASIC5.63□□□□□ -1.51
COL5A2P05997 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A2P05997 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A2P05997 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A2P05997 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL5A2P05997 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms