Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A1P02462 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL4A1P02462 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A1P02462 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A1P02462 AC090220.1-201ENST00000593078 1699 ntBASIC5.11□□□□□ -1.59
COL4A1P02462 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
COL4A1P02462 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A1P02462 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A1P02462 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A1P02462 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.11□□□□□ -1.59
COL4A1P02462 SNORA73.2-201ENST00000364946 201 ntBASIC5.11□□□□□ -1.59
COL4A1P02462 RPL7P58-201ENST00000402913 758 ntBASIC5.11□□□□□ -1.59
COL4A1P02462 AL078604.1-201ENST00000404609 466 ntBASIC5.11□□□□□ -1.59
COL4A1P02462 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.11□□□□□ -1.59
COL4A1P02462 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.11□□□□□ -1.59
COL4A1P02462 AL133547.1-201ENST00000448546 220 ntBASIC5.11□□□□□ -1.59
COL4A1P02462 AC092691.2-201ENST00000461787 803 ntBASIC5.11□□□□□ -1.59
COL4A1P02462 TRMT10BP1-201ENST00000519377 943 ntBASIC5.11□□□□□ -1.59
COL4A1P02462 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A1P02462 AC110743.1-201ENST00000584870 478 ntBASIC5.11□□□□□ -1.59
COL4A1P02462 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A1P02462 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A1P02462 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.11□□□□□ -1.59
COL4A1P02462 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL4A1P02462 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.11□□□□□ -1.59
COL4A1P02462 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.1□□□□□ -1.59
COL4A1P02462 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
COL4A1P02462 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A1P02462 CASC19-261ENST00000641853 1638 ntBASIC5.1□□□□□ -1.59
COL4A1P02462 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A1P02462 HMGN2P27-201ENST00000427352 270 ntBASIC5.1□□□□□ -1.59
COL4A1P02462 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.1□□□□□ -1.59
COL4A1P02462 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.1□□□□□ -1.59
COL4A1P02462 IFITM8P-201ENST00000522529 394 ntBASIC5.1□□□□□ -1.59
COL4A1P02462 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.1□□□□□ -1.59
COL4A1P02462 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.1□□□□□ -1.59
COL4A1P02462 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A1P02462 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A1P02462 AC008966.2-201ENST00000606157 453 ntBASIC5.1□□□□□ -1.59
COL4A1P02462 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A1P02462 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A1P02462 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.1□□□□□ -1.59
COL4A1P02462 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.1□□□□□ -1.59
COL4A1P02462 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A1P02462 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A1P02462 USP9YP4-201ENST00000424401 1745 ntBASIC5.1□□□□□ -1.59
COL4A1P02462 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.1□□□□□ -1.59
COL4A1P02462 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A1P02462 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.1□□□□□ -1.59
COL4A1P02462 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.1□□□□□ -1.59
COL4A1P02462 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A1P02462 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A1P02462 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
COL4A1P02462 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COL4A1P02462 SNORD46.1-201ENST00000364139 104 ntBASIC5.09□□□□□ -1.59
COL4A1P02462 RN7SKP202-201ENST00000410439 330 ntBASIC5.09□□□□□ -1.59
COL4A1P02462 AC069157.1-201ENST00000421749 137 ntBASIC5.09□□□□□ -1.59
COL4A1P02462 OR5BE1P-201ENST00000425977 939 ntBASIC5.09□□□□□ -1.59
COL4A1P02462 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.09□□□□□ -1.59
COL4A1P02462 OR4F13P-201ENST00000428478 931 ntBASIC5.09□□□□□ -1.59
COL4A1P02462 RPL37P1-201ENST00000432310 284 ntBASIC5.09□□□□□ -1.59
COL4A1P02462 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.09□□□□□ -1.59
COL4A1P02462 AL358232.1-201ENST00000448030 501 ntBASIC5.09□□□□□ -1.59
COL4A1P02462 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.09□□□□□ -1.59
COL4A1P02462 AC010460.1-201ENST00000507087 466 ntBASIC5.09□□□□□ -1.59
COL4A1P02462 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.09□□□□□ -1.59
COL4A1P02462 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A1P02462 OR5BE1P-202ENST00000641168 1176 ntBASIC5.09□□□□□ -1.59
COL4A1P02462 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COL4A1P02462 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A1P02462 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
COL4A1P02462 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
COL4A1P02462 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
COL4A1P02462 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
COL4A1P02462 AC003985.2-201ENST00000562268 1669 ntBASIC5.09□□□□□ -1.6
COL4A1P02462 RPL7P2-201ENST00000427639 268 ntBASIC5.08□□□□□ -1.6
COL4A1P02462 AC006946.1-201ENST00000429106 328 ntBASIC5.08□□□□□ -1.6
COL4A1P02462 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.08□□□□□ -1.6
COL4A1P02462 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.08□□□□□ -1.6
COL4A1P02462 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.08□□□□□ -1.6
COL4A1P02462 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.08□□□□□ -1.6
COL4A1P02462 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.08□□□□□ -1.6
COL4A1P02462 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.08□□□□□ -1.6
COL4A1P02462 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.08□□□□□ -1.6
COL4A1P02462 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
COL4A1P02462 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.08□□□□□ -1.6
COL4A1P02462 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.08□□□□□ -1.6
COL4A1P02462 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A1P02462 ZNF402P-201ENST00000404435 3100 ntBASIC5.08□□□□□ -1.6
COL4A1P02462 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.08□□□□□ -1.6
COL4A1P02462 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A1P02462 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.08□□□□□ -1.6
COL4A1P02462 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A1P02462 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
COL4A1P02462 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A1P02462 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A1P02462 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
COL4A1P02462 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
COL4A1P02462 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.08□□□□□ -1.6
COL4A1P02462 RPL17P50-201ENST00000396131 546 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms