Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC008993.2-201ENST00000631744 806 ntBASIC4.87□□□□□ -1.63
LDLRP01130 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.87□□□□□ -1.63
LDLRP01130 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.87□□□□□ -1.63
LDLRP01130 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.87□□□□□ -1.63
LDLRP01130 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
LDLRP01130 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.87□□□□□ -1.63
LDLRP01130 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LDLRP01130 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LDLRP01130 MAPK10-320ENST00000641462 6696 ntBASIC4.87□□□□□ -1.63
LDLRP01130 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LDLRP01130 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.86□□□□□ -1.63
LDLRP01130 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LDLRP01130 SCARNA15-201ENST00000607520 4325 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.86□□□□□ -1.63
LDLRP01130 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LDLRP01130 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LDLRP01130 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LDLRP01130 SNORA72.3-201ENST00000365074 132 ntBASIC4.86□□□□□ -1.63
LDLRP01130 RNA5SP87-201ENST00000384155 118 ntBASIC4.86□□□□□ -1.63
LDLRP01130 SNORA16A-201ENST00000384342 137 ntBASIC4.86□□□□□ -1.63
LDLRP01130 MIR620-201ENST00000385232 95 ntBASIC4.86□□□□□ -1.63
LDLRP01130 SNORA68.2-201ENST00000391263 128 ntBASIC4.86□□□□□ -1.63
LDLRP01130 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
LDLRP01130 AL133388.1-201ENST00000404509 287 ntBASIC4.86□□□□□ -1.63
LDLRP01130 TATDN1P1-201ENST00000414123 891 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.86□□□□□ -1.63
LDLRP01130 AL590139.1-201ENST00000416267 400 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.86□□□□□ -1.63
LDLRP01130 AL512637.2-201ENST00000431287 1256 ntBASIC4.86□□□□□ -1.63
LDLRP01130 BX119904.1-201ENST00000432026 348 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.86□□□□□ -1.63
LDLRP01130 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.86□□□□□ -1.63
LDLRP01130 AL138878.2-201ENST00000440581 1241 ntBASIC4.86□□□□□ -1.63
LDLRP01130 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.86□□□□□ -1.63
LDLRP01130 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LDLRP01130 AL356981.1-201ENST00000454879 684 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.86□□□□□ -1.63
LDLRP01130 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.86□□□□□ -1.63
LDLRP01130 RN7SL385P-201ENST00000468873 276 ntBASIC4.86□□□□□ -1.63
LDLRP01130 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.86□□□□□ -1.63
LDLRP01130 AC020779.1-201ENST00000478757 796 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AC073358.1-201ENST00000505671 684 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AC119751.4-201ENST00000507498 357 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AC006427.1-201ENST00000514359 712 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AC112198.4-201ENST00000515450 351 ntBASIC4.86□□□□□ -1.63
LDLRP01130 RNA5SP249-201ENST00000516127 99 ntBASIC4.86□□□□□ -1.63
LDLRP01130 SOX5P1-201ENST00000524155 1127 ntBASIC4.86□□□□□ -1.63
LDLRP01130 C1DP5-201ENST00000525775 383 ntBASIC4.86□□□□□ -1.63
LDLRP01130 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LDLRP01130 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.86□□□□□ -1.63
LDLRP01130 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.86□□□□□ -1.63
LDLRP01130 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.86□□□□□ -1.63
LDLRP01130 AC008507.2-201ENST00000588402 1176 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.86□□□□□ -1.63
LDLRP01130 AC245884.10-201ENST00000597355 337 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AC026741.1-201ENST00000605892 482 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AC018645.2-201ENST00000609151 472 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AC063944.3-201ENST00000609969 533 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AL391834.2-201ENST00000609982 546 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.86□□□□□ -1.63
LDLRP01130 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LDLRP01130 AL049777.1-201ENST00000622740 518 ntBASIC4.86□□□□□ -1.63
LDLRP01130 CYP4F35P-202ENST00000636121 390 ntBASIC4.86□□□□□ -1.63
LDLRP01130 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LDLRP01130 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LDLRP01130 CASC19-221ENST00000641309 1382 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AC107068.1-201ENST00000563286 4218 ntBASIC4.86□□□□□ -1.63
LDLRP01130 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.86□□□□□ -1.63
LDLRP01130 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.86□□□□□ -1.63
LDLRP01130 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
LDLRP01130 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LDLRP01130 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
LDLRP01130 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.85□□□□□ -1.63
LDLRP01130 ZNF90P1-201ENST00000480493 1951 ntBASIC4.85□□□□□ -1.63
LDLRP01130 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.85□□□□□ -1.63
LDLRP01130 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LDLRP01130 SCN1A-220ENST00000641603 12506 ntBASIC4.85□□□□□ -1.63
LDLRP01130 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LDLRP01130 INTS6P1-201ENST00000504674 2530 ntBASIC4.85□□□□□ -1.63
LDLRP01130 OR55B1P-203ENST00000641518 2602 ntBASIC4.85□□□□□ -1.63
LDLRP01130 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LDLRP01130 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LDLRP01130 RNU4-7P-201ENST00000364758 141 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.85□□□□□ -1.63
LDLRP01130 ATP5HP3-201ENST00000396994 486 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AL035405.1-201ENST00000400795 710 ntBASIC4.85□□□□□ -1.63
LDLRP01130 RPL5P19-201ENST00000404228 893 ntBASIC4.85□□□□□ -1.63
LDLRP01130 RN7SKP126-201ENST00000411143 300 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.85□□□□□ -1.63
LDLRP01130 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.85□□□□□ -1.63
LDLRP01130 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.85□□□□□ -1.63
LDLRP01130 RPL7AP61-201ENST00000443410 636 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AC011753.3-201ENST00000443436 406 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.85□□□□□ -1.63
LDLRP01130 GAPDHP25-201ENST00000447061 1001 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.85□□□□□ -1.63
LDLRP01130 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LDLRP01130 CALM1P2-201ENST00000452941 448 ntBASIC4.85□□□□□ -1.63
LDLRP01130 TVP23BP2-201ENST00000455082 615 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AC093166.2-201ENST00000455969 1017 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms