Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 LINC00622-201ENST00000562811 1570 ntBASIC1.89□□□□□ -2.11
USH2AO75445 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC1.89□□□□□ -2.11
USH2AO75445 ZNF826P-207ENST00000622273 1910 ntBASIC1.89□□□□□ -2.11
USH2AO75445 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 XGY1-201ENST00000381172 446 ntBASIC1.89□□□□□ -2.11
USH2AO75445 RNU2-65P-201ENST00000410162 185 ntBASIC1.89□□□□□ -2.11
USH2AO75445 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.89□□□□□ -2.11
USH2AO75445 RPL32P28-201ENST00000443577 397 ntBASIC1.89□□□□□ -2.11
USH2AO75445 RAD23BP3-201ENST00000454157 1152 ntBASIC1.89□□□□□ -2.11
USH2AO75445 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC1.89□□□□□ -2.11
USH2AO75445 RPS3AP14-201ENST00000483907 780 ntBASIC1.89□□□□□ -2.11
USH2AO75445 AC015912.2-201ENST00000571053 181 ntBASIC1.89□□□□□ -2.11
USH2AO75445 MIR3922-201ENST00000585192 84 ntBASIC1.89□□□□□ -2.11
USH2AO75445 U3.45-201ENST00000607547 219 ntBASIC1.89□□□□□ -2.11
USH2AO75445 AL031666.3-201ENST00000609320 1006 ntBASIC1.89□□□□□ -2.11
USH2AO75445 MIR8058-201ENST00000615737 89 ntBASIC1.89□□□□□ -2.11
USH2AO75445 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC1.89□□□□□ -2.11
USH2AO75445 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
USH2AO75445 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
USH2AO75445 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC1.89□□□□□ -2.11
USH2AO75445 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
USH2AO75445 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC1.89□□□□□ -2.11
USH2AO75445 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 AC068733.2-201ENST00000605434 1418 ntBASIC1.89□□□□□ -2.11
USH2AO75445 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 AL139247.1-201ENST00000422768 325 ntBASIC1.89□□□□□ -2.11
USH2AO75445 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC1.89□□□□□ -2.11
USH2AO75445 RPS4XP4-201ENST00000443195 763 ntBASIC1.89□□□□□ -2.11
USH2AO75445 DNAJC19P8-201ENST00000452887 259 ntBASIC1.89□□□□□ -2.11
USH2AO75445 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC1.89□□□□□ -2.11
USH2AO75445 AL049830.4-201ENST00000555149 351 ntBASIC1.89□□□□□ -2.11
USH2AO75445 AC006504.3-201ENST00000586818 523 ntBASIC1.89□□□□□ -2.11
USH2AO75445 AC006386.2-201ENST00000624491 75 ntBASIC1.89□□□□□ -2.11
USH2AO75445 AC012005.1-201ENST00000624575 75 ntBASIC1.89□□□□□ -2.11
USH2AO75445 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
USH2AO75445 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
USH2AO75445 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC1.88□□□□□ -2.11
USH2AO75445 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 RNA5SP267-201ENST00000364893 126 ntBASIC1.88□□□□□ -2.11
USH2AO75445 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 FTH1P1-201ENST00000437933 532 ntBASIC1.88□□□□□ -2.11
USH2AO75445 CCRL1P1-201ENST00000449542 1053 ntBASIC1.88□□□□□ -2.11
USH2AO75445 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 AC096576.1-201ENST00000489014 359 ntBASIC1.88□□□□□ -2.11
USH2AO75445 HIGD1AP18-201ENST00000520730 278 ntBASIC1.88□□□□□ -2.11
USH2AO75445 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC1.88□□□□□ -2.11
USH2AO75445 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC1.88□□□□□ -2.11
USH2AO75445 MIR6891-201ENST00000618788 93 ntBASIC1.88□□□□□ -2.11
USH2AO75445 AC008013.2-202ENST00000637965 364 ntBASIC1.88□□□□□ -2.11
USH2AO75445 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
USH2AO75445 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC1.88□□□□□ -2.11
USH2AO75445 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
USH2AO75445 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 RNU1-20P-201ENST00000363314 162 ntBASIC1.88□□□□□ -2.11
USH2AO75445 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC1.88□□□□□ -2.11
USH2AO75445 MRPS33P4-201ENST00000434892 317 ntBASIC1.88□□□□□ -2.11
USH2AO75445 AC004980.3-201ENST00000447046 365 ntBASIC1.88□□□□□ -2.11
USH2AO75445 AC005868.1-201ENST00000536421 331 ntBASIC1.88□□□□□ -2.11
USH2AO75445 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC1.88□□□□□ -2.11
USH2AO75445 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 AC110801.1-201ENST00000623590 212 ntBASIC1.88□□□□□ -2.11
USH2AO75445 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 AL445487.1-201ENST00000415694 1580 ntBASIC1.88□□□□□ -2.11
USH2AO75445 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
USH2AO75445 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms