Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CEACAMP9-201ENST00000442990 513 ntBASIC4.42□□□□□ -1.7
HCN1O60741 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.42□□□□□ -1.7
HCN1O60741 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.42□□□□□ -1.7
HCN1O60741 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.42□□□□□ -1.7
HCN1O60741 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.42□□□□□ -1.7
HCN1O60741 RPS5P7-201ENST00000456664 608 ntBASIC4.42□□□□□ -1.7
HCN1O60741 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.42□□□□□ -1.7
HCN1O60741 RPL23AP56-201ENST00000460778 453 ntBASIC4.42□□□□□ -1.7
HCN1O60741 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.42□□□□□ -1.7
HCN1O60741 RN7SL817P-201ENST00000480777 288 ntBASIC4.42□□□□□ -1.7
HCN1O60741 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.42□□□□□ -1.7
HCN1O60741 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HCN1O60741 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HCN1O60741 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.42□□□□□ -1.7
HCN1O60741 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.42□□□□□ -1.7
HCN1O60741 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.42□□□□□ -1.7
HCN1O60741 MORF4L1P3-201ENST00000525966 950 ntBASIC4.42□□□□□ -1.7
HCN1O60741 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.42□□□□□ -1.7
HCN1O60741 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.42□□□□□ -1.7
HCN1O60741 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.42□□□□□ -1.7
HCN1O60741 MIR4330-201ENST00000579077 105 ntBASIC4.42□□□□□ -1.7
HCN1O60741 RPL26P30-202ENST00000602923 645 ntBASIC4.42□□□□□ -1.7
HCN1O60741 AC091979.2-201ENST00000607514 214 ntBASIC4.42□□□□□ -1.7
HCN1O60741 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HCN1O60741 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.42□□□□□ -1.7
HCN1O60741 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.42□□□□□ -1.7
HCN1O60741 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.42□□□□□ -1.7
HCN1O60741 AC006453.5-201ENST00000636451 619 ntBASIC4.42□□□□□ -1.7
HCN1O60741 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.42□□□□□ -1.7
HCN1O60741 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.42□□□□□ -1.7
HCN1O60741 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HCN1O60741 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HCN1O60741 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HCN1O60741 AC087565.3-202ENST00000642085 1603 ntBASIC4.42□□□□□ -1.7
HCN1O60741 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.41□□□□□ -1.7
HCN1O60741 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.41□□□□□ -1.7
HCN1O60741 OR52B1P-201ENST00000316506 909 ntBASIC4.41□□□□□ -1.7
HCN1O60741 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HCN1O60741 Y_RNA.625-201ENST00000411256 107 ntBASIC4.41□□□□□ -1.7
HCN1O60741 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.41□□□□□ -1.7
HCN1O60741 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.41□□□□□ -1.7
HCN1O60741 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 AL451139.1-201ENST00000434718 346 ntBASIC4.41□□□□□ -1.7
HCN1O60741 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.41□□□□□ -1.7
HCN1O60741 RNU6-709P-201ENST00000517257 104 ntBASIC4.41□□□□□ -1.7
HCN1O60741 BUD31P1-201ENST00000521828 359 ntBASIC4.41□□□□□ -1.7
HCN1O60741 AC087477.6-201ENST00000559595 843 ntBASIC4.41□□□□□ -1.7
HCN1O60741 ATP5J2P6-201ENST00000565203 266 ntBASIC4.41□□□□□ -1.7
HCN1O60741 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.41□□□□□ -1.7
HCN1O60741 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.41□□□□□ -1.7
HCN1O60741 AC234771.5-201ENST00000600161 514 ntBASIC4.41□□□□□ -1.7
HCN1O60741 AC010424.2-201ENST00000607594 443 ntBASIC4.41□□□□□ -1.7
HCN1O60741 AC009237.17-201ENST00000618111 748 ntBASIC4.41□□□□□ -1.7
HCN1O60741 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HCN1O60741 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.41□□□□□ -1.7
HCN1O60741 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 NCLP2-201ENST00000416078 1462 ntBASIC4.41□□□□□ -1.7
HCN1O60741 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.41□□□□□ -1.7
HCN1O60741 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HCN1O60741 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCN1O60741 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.41□□□□□ -1.7
HCN1O60741 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HCN1O60741 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HCN1O60741 AC009313.2-201ENST00000417893 1941 ntBASIC4.4□□□□□ -1.7
HCN1O60741 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.7
HCN1O60741 MAPK10-303ENST00000641324 3959 ntBASIC4.4□□□□□ -1.7
HCN1O60741 AC091046.3-201ENST00000631455 1574 ntBASIC4.4□□□□□ -1.7
HCN1O60741 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
HCN1O60741 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
HCN1O60741 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
HCN1O60741 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HCN1O60741 VN2R3P-201ENST00000422626 1412 ntBASIC4.4□□□□□ -1.7
HCN1O60741 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HCN1O60741 AC110792.3-201ENST00000595906 1614 ntBASIC4.4□□□□□ -1.7
HCN1O60741 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HCN1O60741 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
HCN1O60741 OR14L1P-202ENST00000641545 3009 ntBASIC4.4□□□□□ -1.71
HCN1O60741 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.4□□□□□ -1.71
HCN1O60741 AC010132.2-201ENST00000295493 1043 ntBASIC4.4□□□□□ -1.71
HCN1O60741 RNU1-83P-201ENST00000363426 164 ntBASIC4.4□□□□□ -1.71
HCN1O60741 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.4□□□□□ -1.71
HCN1O60741 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HCN1O60741 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HCN1O60741 MIR195-201ENST00000385194 87 ntBASIC4.4□□□□□ -1.71
HCN1O60741 AL357515.1-201ENST00000402967 542 ntBASIC4.4□□□□□ -1.71
HCN1O60741 HDGFP1-201ENST00000405943 252 ntBASIC4.4□□□□□ -1.71
HCN1O60741 RPS16P5-201ENST00000406501 404 ntBASIC4.4□□□□□ -1.71
HCN1O60741 TBCAP2-201ENST00000416175 326 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms