Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX4O60224 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX4O60224 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
SSX4O60224 AL672167.1-203ENST00000641299 2975 ntBASIC4.63□□□□□ -1.67
SSX4O60224 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX4O60224 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX4O60224 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX4O60224 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SSX4O60224 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX4O60224 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX4O60224 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SSX4O60224 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SSX4O60224 MIR133B-201ENST00000362210 119 ntBASIC4.63□□□□□ -1.67
SSX4O60224 RNA5SP339-201ENST00000390987 122 ntBASIC4.63□□□□□ -1.67
SSX4O60224 AL589647.1-201ENST00000402485 466 ntBASIC4.63□□□□□ -1.67
SSX4O60224 AL133388.1-201ENST00000404509 287 ntBASIC4.63□□□□□ -1.67
SSX4O60224 AC007738.1-201ENST00000413892 348 ntBASIC4.63□□□□□ -1.67
SSX4O60224 PCNPP4-201ENST00000414817 517 ntBASIC4.63□□□□□ -1.67
SSX4O60224 AC073310.1-201ENST00000423226 1033 ntBASIC4.63□□□□□ -1.67
SSX4O60224 AC108075.1-201ENST00000424692 529 ntBASIC4.63□□□□□ -1.67
SSX4O60224 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX4O60224 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX4O60224 RPS7P2-201ENST00000435134 607 ntBASIC4.63□□□□□ -1.67
SSX4O60224 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX4O60224 RPS11P7-201ENST00000442125 465 ntBASIC4.63□□□□□ -1.67
SSX4O60224 FHP1-201ENST00000442741 703 ntBASIC4.63□□□□□ -1.67
SSX4O60224 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX4O60224 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX4O60224 RN7SL423P-201ENST00000486202 304 ntBASIC4.63□□□□□ -1.67
SSX4O60224 RN7SL97P-201ENST00000486780 299 ntBASIC4.63□□□□□ -1.67
SSX4O60224 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.63□□□□□ -1.67
SSX4O60224 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX4O60224 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX4O60224 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX4O60224 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.63□□□□□ -1.67
SSX4O60224 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX4O60224 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX4O60224 AP005403.1-201ENST00000579720 229 ntBASIC4.63□□□□□ -1.67
SSX4O60224 H3F3BP2-201ENST00000583907 357 ntBASIC4.63□□□□□ -1.67
SSX4O60224 AC090330.1-201ENST00000588646 764 ntBASIC4.63□□□□□ -1.67
SSX4O60224 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX4O60224 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX4O60224 AC112503.1-201ENST00000608436 391 ntBASIC4.63□□□□□ -1.67
SSX4O60224 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX4O60224 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX4O60224 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX4O60224 FRG1HP-204ENST00000617940 757 ntBASIC4.63□□□□□ -1.67
SSX4O60224 AL512427.1-201ENST00000618593 349 ntBASIC4.63□□□□□ -1.67
SSX4O60224 AL669942.2-201ENST00000620352 697 ntBASIC4.63□□□□□ -1.67
SSX4O60224 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX4O60224 AL445984.1-201ENST00000637834 659 ntBASIC4.63□□□□□ -1.67
SSX4O60224 AC006927.2-201ENST00000639256 389 ntBASIC4.63□□□□□ -1.67
SSX4O60224 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.63□□□□□ -1.67
SSX4O60224 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SSX4O60224 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX4O60224 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSX4O60224 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
SSX4O60224 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SSX4O60224 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SSX4O60224 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 Z95327.2-201ENST00000414579 1873 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
SSX4O60224 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.62□□□□□ -1.67
SSX4O60224 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 RNU5B-4P-201ENST00000363508 111 ntBASIC4.62□□□□□ -1.67
SSX4O60224 RN7SKP103-201ENST00000363848 320 ntBASIC4.62□□□□□ -1.67
SSX4O60224 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 AC234772.1-201ENST00000377927 937 ntBASIC4.62□□□□□ -1.67
SSX4O60224 SNORA16A-201ENST00000384342 137 ntBASIC4.62□□□□□ -1.67
SSX4O60224 MIR550A3-201ENST00000390735 95 ntBASIC4.62□□□□□ -1.67
SSX4O60224 RNU1-149P-201ENST00000390870 161 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.62□□□□□ -1.67
SSX4O60224 AL133270.1-201ENST00000402635 279 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.62□□□□□ -1.67
SSX4O60224 UBE2V1P9-201ENST00000414760 368 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AL358176.3-201ENST00000420757 454 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AC241520.1-201ENST00000422654 1099 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AL590762.4-201ENST00000425885 253 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX4O60224 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.62□□□□□ -1.67
SSX4O60224 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 AC011242.1-201ENST00000433596 1158 ntBASIC4.62□□□□□ -1.67
SSX4O60224 GSTM5P1-201ENST00000434751 660 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AC092447.2-201ENST00000435487 669 ntBASIC4.62□□□□□ -1.67
SSX4O60224 TMX2P1-201ENST00000436507 708 ntBASIC4.62□□□□□ -1.67
SSX4O60224 MED6P1-201ENST00000439659 713 ntBASIC4.62□□□□□ -1.67
SSX4O60224 RPL7AP61-201ENST00000443410 636 ntBASIC4.62□□□□□ -1.67
SSX4O60224 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 AL035407.2-201ENST00000454090 378 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AL035090.1-201ENST00000454835 332 ntBASIC4.62□□□□□ -1.67
SSX4O60224 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms