Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.98□□□□□ -1.61
LDB2O43679 MTATP6P26-201ENST00000445926 662 ntBASIC4.98□□□□□ -1.61
LDB2O43679 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.98□□□□□ -1.61
LDB2O43679 AC239798.3-201ENST00000454459 408 ntBASIC4.98□□□□□ -1.61
LDB2O43679 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.98□□□□□ -1.61
LDB2O43679 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.98□□□□□ -1.61
LDB2O43679 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.98□□□□□ -1.61
LDB2O43679 BOLA3P3-201ENST00000505182 232 ntBASIC4.98□□□□□ -1.61
LDB2O43679 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.98□□□□□ -1.61
LDB2O43679 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.98□□□□□ -1.61
LDB2O43679 NDUFB5P1-201ENST00000508134 564 ntBASIC4.98□□□□□ -1.61
LDB2O43679 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LDB2O43679 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDB2O43679 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LDB2O43679 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LDB2O43679 CYB5AP5-201ENST00000549779 389 ntBASIC4.98□□□□□ -1.61
LDB2O43679 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LDB2O43679 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.98□□□□□ -1.61
LDB2O43679 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.98□□□□□ -1.61
LDB2O43679 AC025811.1-201ENST00000604312 472 ntBASIC4.98□□□□□ -1.61
LDB2O43679 MEMO1P5-201ENST00000604810 406 ntBASIC4.98□□□□□ -1.61
LDB2O43679 AC025175.1-201ENST00000606482 759 ntBASIC4.98□□□□□ -1.61
LDB2O43679 RNU4-5P-201ENST00000607255 135 ntBASIC4.98□□□□□ -1.61
LDB2O43679 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.98□□□□□ -1.61
LDB2O43679 Mico1.1-201ENST00000611698 204 ntBASIC4.98□□□□□ -1.61
LDB2O43679 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.98□□□□□ -1.61
LDB2O43679 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.98□□□□□ -1.61
LDB2O43679 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDB2O43679 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.98□□□□□ -1.61
LDB2O43679 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDB2O43679 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDB2O43679 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LDB2O43679 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LDB2O43679 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LDB2O43679 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.97□□□□□ -1.61
LDB2O43679 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LDB2O43679 CASC19-281ENST00000642118 1554 ntBASIC4.97□□□□□ -1.61
LDB2O43679 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LDB2O43679 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LDB2O43679 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LDB2O43679 MIR550A3-201ENST00000390735 95 ntBASIC4.97□□□□□ -1.61
LDB2O43679 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LDB2O43679 AL078599.1-201ENST00000402075 293 ntBASIC4.97□□□□□ -1.61
LDB2O43679 AP002530.1-201ENST00000405705 684 ntBASIC4.97□□□□□ -1.61
LDB2O43679 ATF1P1-201ENST00000406040 927 ntBASIC4.97□□□□□ -1.61
LDB2O43679 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.97□□□□□ -1.61
LDB2O43679 GJA6P-201ENST00000415117 1042 ntBASIC4.97□□□□□ -1.61
LDB2O43679 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.97□□□□□ -1.61
LDB2O43679 OR5M12P-201ENST00000423388 929 ntBASIC4.97□□□□□ -1.61
LDB2O43679 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.97□□□□□ -1.61
LDB2O43679 AC092634.2-201ENST00000428146 1010 ntBASIC4.97□□□□□ -1.61
LDB2O43679 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.97□□□□□ -1.61
LDB2O43679 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.97□□□□□ -1.61
LDB2O43679 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.97□□□□□ -1.61
LDB2O43679 AC023512.1-201ENST00000444513 499 ntBASIC4.97□□□□□ -1.61
LDB2O43679 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LDB2O43679 AC069540.1-201ENST00000446320 988 ntBASIC4.97□□□□□ -1.61
LDB2O43679 AC099063.2-201ENST00000446360 662 ntBASIC4.97□□□□□ -1.61
LDB2O43679 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.97□□□□□ -1.61
LDB2O43679 AC093166.2-201ENST00000455969 1017 ntBASIC4.97□□□□□ -1.61
LDB2O43679 snoU13.20-201ENST00000459180 104 ntBASIC4.97□□□□□ -1.61
LDB2O43679 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.97□□□□□ -1.61
LDB2O43679 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.97□□□□□ -1.61
LDB2O43679 MRPS33P2-201ENST00000507850 322 ntBASIC4.97□□□□□ -1.61
LDB2O43679 RN7SKP141-201ENST00000516167 338 ntBASIC4.97□□□□□ -1.61
LDB2O43679 MTCYBP19-201ENST00000517463 1124 ntBASIC4.97□□□□□ -1.61
LDB2O43679 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.97□□□□□ -1.61
LDB2O43679 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.97□□□□□ -1.61
LDB2O43679 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.97□□□□□ -1.61
LDB2O43679 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
LDB2O43679 AC005868.1-201ENST00000536421 331 ntBASIC4.97□□□□□ -1.61
LDB2O43679 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.97□□□□□ -1.61
LDB2O43679 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.97□□□□□ -1.61
LDB2O43679 MTND3P12-201ENST00000559068 328 ntBASIC4.97□□□□□ -1.61
LDB2O43679 MIR4436B2-201ENST00000581415 91 ntBASIC4.97□□□□□ -1.61
LDB2O43679 MIR4436B1-201ENST00000583272 91 ntBASIC4.97□□□□□ -1.61
LDB2O43679 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.97□□□□□ -1.61
LDB2O43679 AC133644.2-201ENST00000608142 540 ntBASIC4.97□□□□□ -1.61
LDB2O43679 AC097065.2-201ENST00000608159 533 ntBASIC4.97□□□□□ -1.61
LDB2O43679 AL159169.2-201ENST00000610061 1269 ntBASIC4.97□□□□□ -1.61
LDB2O43679 AL049794.2-201ENST00000616301 365 ntBASIC4.97□□□□□ -1.61
LDB2O43679 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.97□□□□□ -1.61
LDB2O43679 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.97□□□□□ -1.61
LDB2O43679 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.97□□□□□ -1.61
LDB2O43679 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.97□□□□□ -1.61
LDB2O43679 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
LDB2O43679 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LDB2O43679 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
LDB2O43679 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LDB2O43679 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
LDB2O43679 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
LDB2O43679 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.62
LDB2O43679 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.96□□□□□ -1.62
LDB2O43679 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LDB2O43679 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
LDB2O43679 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LDB2O43679 AC007996.1-201ENST00000620414 2821 ntBASIC4.96□□□□□ -1.62
LDB2O43679 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LDB2O43679 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LDB2O43679 RN7SKP103-201ENST00000363848 320 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms