Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.58□□□□□ -1.52
FOXN3O00409 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXN3O00409 NIFKP8-201ENST00000560500 874 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.58□□□□□ -1.52
FOXN3O00409 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXN3O00409 FKBP1AP1-201ENST00000594588 318 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
FOXN3O00409 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.58□□□□□ -1.52
FOXN3O00409 AC069307.1-201ENST00000602820 447 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXN3O00409 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXN3O00409 AC108359.1-201ENST00000616451 1211 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 ATE1-AS1-202ENST00000636460 506 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXN3O00409 AC073136.1-201ENST00000449426 2884 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 AL450326.2-201ENST00000421913 1962 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXN3O00409 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXN3O00409 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXN3O00409 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXN3O00409 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXN3O00409 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXN3O00409 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXN3O00409 AC104446.1-201ENST00000613728 1321 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
FOXN3O00409 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
FOXN3O00409 RNU4-68P-201ENST00000364314 141 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 RNA5SP223-201ENST00000365174 120 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 RN7SKP269-201ENST00000365545 319 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 OR52E6-202ENST00000379946 954 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 AF228730.1-201ENST00000397972 663 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 RPL21P67-201ENST00000402896 478 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 AL512422.1-201ENST00000407033 553 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 OR3A2-201ENST00000408891 1076 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 RN7SKP16-201ENST00000410180 299 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXN3O00409 RPS7P9-201ENST00000414704 586 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXN3O00409 AC009302.1-201ENST00000417147 390 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 AC009238.2-201ENST00000431026 355 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 AL389925.1-201ENST00000432257 728 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 RPS29P10-201ENST00000439197 166 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.57□□□□□ -1.52
FOXN3O00409 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXN3O00409 NPM1P13-201ENST00000452663 865 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 AC016724.1-201ENST00000453215 421 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXN3O00409 AC245028.2-201ENST00000458673 253 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 AC021660.1-201ENST00000465006 554 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXN3O00409 AC105233.1-201ENST00000498840 781 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXN3O00409 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.57□□□□□ -1.52
FOXN3O00409 snoZ278.1-201ENST00000517059 112 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 AC012400.1-201ENST00000518452 381 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXN3O00409 OR7E128P-201ENST00000532736 1024 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXN3O00409 LRRC34P1-201ENST00000542742 915 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
FOXN3O00409 MTND3P12-201ENST00000559068 328 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.57□□□□□ -1.52
FOXN3O00409 AC019322.1-201ENST00000571869 389 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.57□□□□□ -1.52
FOXN3O00409 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
FOXN3O00409 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
FOXN3O00409 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXN3O00409 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXN3O00409 AC011755.1-201ENST00000623763 2049 ntBASIC5.57□□□□□ -1.52
FOXN3O00409 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXN3O00409 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXN3O00409 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXN3O00409 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
FOXN3O00409 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
FOXN3O00409 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
FOXN3O00409 AC005332.5-201ENST00000591222 2919 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 MTND4P31-201ENST00000425607 1343 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 AC235565.1-201ENST00000456962 1325 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXN3O00409 AC004817.4-201ENST00000602396 3625 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FOXN3O00409 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
FOXN3O00409 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FOXN3O00409 MIR323A-201ENST00000362199 86 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 RN7SKP160-201ENST00000363804 340 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXN3O00409 RNU6-178P-201ENST00000384631 104 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXN3O00409 RN7SKP59-201ENST00000410520 314 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 SETP15-201ENST00000412724 337 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXN3O00409 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.56□□□□□ -1.52
FOXN3O00409 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXN3O00409 OR2X1P-201ENST00000421144 687 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 CHEK2P5-201ENST00000423877 246 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FOXN3O00409 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXN3O00409 CFL1P1-202ENST00000432948 411 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 SPRYD7P1-201ENST00000443861 570 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 MTCYBP42-201ENST00000444653 1130 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms