Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC233702.9-201ENST00000581528 203 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC209154.1-201ENST00000582156 337 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC011453.2-201ENST00000603737 729 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC093799.2-201ENST00000610062 578 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC008759.3-201ENST00000613300 508 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC005156.1-201ENST00000613371 573 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AP001005.3-201ENST00000622049 129 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC140113.4-201ENST00000622087 222 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC093875.1-201ENST00000623688 504 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL590396.2-201ENST00000636511 1041 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MTND4P9-201ENST00000507819 1346 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC099654.2-201ENST00000433031 1980 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RN7SKP15-201ENST00000364742 309 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RNU6-185P-201ENST00000384421 107 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RNU6-1257P-201ENST00000384625 110 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 Z97832.1-201ENST00000402490 328 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC233289.1-201ENST00000403700 508 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SETP15-201ENST00000412724 337 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 GJA6P-201ENST00000415117 1042 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC01347-201ENST00000417964 355 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 OR51A6P-201ENST00000418680 1004 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 PPIAP13-201ENST00000434706 478 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RPL7P11-201ENST00000437586 658 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 PRPF38AP2-201ENST00000438179 851 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL606490.1-201ENST00000452266 765 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC079841.1-201ENST00000481228 950 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RPL7P51-201ENST00000490532 749 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 NAMPTP2-201ENST00000505629 1115 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC021146.3-201ENST00000511911 260 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AP000916.1-201ENST00000533869 835 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC092490.3-201ENST00000545370 572 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC008083.2-201ENST00000546707 476 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC079610.2-201ENST00000604818 690 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC021851.1-201ENST00000608537 1082 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AP005229.2-201ENST00000609980 697 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL121890.2-201ENST00000617644 465 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC004232.3-201ENST00000622977 525 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC007342.8-201ENST00000623278 678 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC010435.1-201ENST00000623353 1177 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC024023.1-201ENST00000624530 922 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC092435.4-201ENST00000623012 4159 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CCT8P1-201ENST00000413611 1657 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 PABPC1P6-201ENST00000445594 1829 ntBASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV4-1A0A0J9YWV2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MAPK10-303ENST00000641324 3959 ntBASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 OR56B2P-201ENST00000317102 954 ntBASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 IL6STP1-201ENST00000346911 1020 ntBASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RNU6-481P-201ENST00000384194 107 ntBASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC069282.1-201ENST00000411911 526 ntBASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 Z68694.1-201ENST00000413929 841 ntBASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.34□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms