Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 TCP1P3-201ENST00000414406 1498 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 SMG1P4-204ENST00000523028 4131 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 LINC01109-201ENST00000603837 3081 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC022893.2-201ENST00000564832 3296 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 OR4K15-201ENST00000305051 1216 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 SNORD51.1-201ENST00000365405 77 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 RNA5SP332-201ENST00000391063 115 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 ATP5HP3-201ENST00000396994 486 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 P2RY10P2-201ENST00000416730 913 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AF186996.5-201ENST00000418098 904 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 RPS6P2-201ENST00000454208 705 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AL356981.1-201ENST00000454879 684 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 RPL7P48-201ENST00000461513 746 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 MTND6P6-201ENST00000478031 263 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC093663.2-201ENST00000484625 313 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC093720.1-201ENST00000505681 714 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 COL6A4P2-205ENST00000509855 506 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 ATP5J2P6-201ENST00000565203 266 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 TVP23CP2-201ENST00000571473 623 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC040174.2-201ENST00000602701 465 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AP005432.2-201ENST00000608162 586 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 CR381572.2-201ENST00000624852 397 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC006453.5-201ENST00000636451 619 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC006210.2-201ENST00000367074 1545 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 SAMMSON-226ENST00000642089 1582 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 AC093311.1-201ENST00000506586 2021 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 MAPK10-349ENST00000641767 3661 ntBASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PCDHGA1Q9Y5H4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 DHX40P1-201ENST00000588725 1412 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 OR9G4-201ENST00000302957 984 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 RNU6-40P-201ENST00000384254 107 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 RNU6-146P-201ENST00000384602 108 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 MTATP6P11-201ENST00000428071 670 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 NRBF2P3-201ENST00000432731 865 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 AC093414.1-201ENST00000434712 514 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 AURKAPS2-201ENST00000454983 333 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 AC103987.1-201ENST00000473394 348 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 AC026979.1-201ENST00000492525 396 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 AC005912.1-201ENST00000495392 255 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 AC111000.3-201ENST00000508057 576 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 SEPT10P1-201ENST00000517342 1162 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 NPM1P47-201ENST00000560843 856 ntBASIC4.84□□□□□ -1.63
PCDHGA1Q9Y5H4 AC090312.1-201ENST00000580637 348 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms