Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 CDY7P-201ENST00000429883 1604 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 Y_RNA.259-201ENST00000364619 101 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 SNORA20.2-201ENST00000383922 131 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 MIR191-201ENST00000384873 92 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 PDCL3P5-201ENST00000398028 722 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AL121916.1-201ENST00000429405 308 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 RBMY2QP-201ENST00000429799 1147 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AL845321.1-201ENST00000444603 348 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 PRPF38AP1-201ENST00000451976 933 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AC022080.2-201ENST00000452932 533 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 BX323845.2-201ENST00000458382 234 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 KLHL2P1-201ENST00000508691 521 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AC109481.1-201ENST00000509173 282 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 BTF3P13-201ENST00000513224 490 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 RNU6-1314P-201ENST00000517139 104 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 COX6CP8-201ENST00000522620 226 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 PSMA2P1-201ENST00000526365 646 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AL078601.3-201ENST00000573303 535 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AC124303.1-201ENST00000605703 360 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 AL132822.1-201ENST00000617063 513 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 NCOA4P3-201ENST00000513203 1877 ntBASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
PCDHB11Q9Y5F2 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 RN7SKP6-201ENST00000364795 319 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 RNU6-108P-201ENST00000365558 107 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 MIR152-201ENST00000385212 87 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 LDHAP5-201ENST00000394996 622 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AL136116.1-201ENST00000403591 381 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AL033519.1-201ENST00000407266 307 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 RNU2-9P-201ENST00000410194 145 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 RPL24P2-201ENST00000421023 475 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 RPEP4-201ENST00000437636 602 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC005517.1-201ENST00000452091 489 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms