Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AL359715.4-201ENST00000606629 1436 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC107068.1-201ENST00000563286 4218 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
ATG4BQ9Y4P1 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.53□□□□□ -1.69
ATG4BQ9Y4P1 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.53□□□□□ -1.69
ATG4BQ9Y4P1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 UBBP2-201ENST00000376781 231 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 ARL4AP5-201ENST00000404372 599 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 VN1R37P-201ENST00000419096 748 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC099336.2-201ENST00000422457 254 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AL049745.1-201ENST00000433953 286 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC008072.1-201ENST00000434254 824 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 Z80107.2-201ENST00000445127 392 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 CLIC4P1-201ENST00000453177 535 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC099560.2-201ENST00000457554 255 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC063943.1-201ENST00000465434 453 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC091868.1-201ENST00000508746 304 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 COL6A4P2-205ENST00000509855 506 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 RNU6-1004P-201ENST00000516584 111 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AP003168.1-201ENST00000530091 307 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 MIR4737-201ENST00000583979 81 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AL049844.2-201ENST00000604280 628 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AL162574.2-201ENST00000614618 657 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 AC009313.2-201ENST00000417893 1941 ntBASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
ATG4BQ9Y4P1 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 SCN1A-220ENST00000641603 12506 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 RNU6-40P-201ENST00000384254 107 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 TRGV6-201ENST00000417928 299 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AC004074.1-201ENST00000421810 1063 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AC012519.1-201ENST00000424588 610 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 RPS15AP29-201ENST00000445539 400 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AL589765.3-201ENST00000446084 462 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 MTND2P25-201ENST00000449028 610 ntBASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4BQ9Y4P1 AL354710.1-201ENST00000453641 246 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms