Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 UBA52P6-201ENST00000399822 382 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC010285.3-201ENST00000511668 676 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 RN7SKP141-201ENST00000516167 338 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 uc_338.7-201ENST00000621834 124 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 MAPK10-349ENST00000641767 3661 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 IGKV1OR22-5-201ENST00000458718 354 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 CPHL1P-201ENST00000461341 3407 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 MAPK10-371ENST00000641952 5209 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 RNU1-20P-201ENST00000363314 162 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC090142.1-201ENST00000465776 462 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AGGF1P3-201ENST00000493675 1213 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 PCBP2P3-201ENST00000509726 843 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 RNA5SP360-201ENST00000516555 118 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 RNU6-709P-201ENST00000517257 104 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC011626.1-201ENST00000604710 562 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AL160394.1-201ENST00000624765 724 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 BMS1P21-201ENST00000634565 365 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 NDUFB4P8-201ENST00000435351 367 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 snoU109.5-201ENST00000516231 132 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AL049634.3-201ENST00000604968 457 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AL645927.2-201ENST00000618350 349 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 CDY5P-201ENST00000411487 1580 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 CDY9P-201ENST00000451397 1580 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC004014.2-201ENST00000623718 5122 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 MIR30B-201ENST00000384850 88 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC008155.2-201ENST00000464337 397 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC091868.1-201ENST00000508746 304 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AL390838.2-201ENST00000602394 274 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC243960.7-201ENST00000623532 707 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms