Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 OR56B2P-201ENST00000317102 954 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 OR6C69P-201ENST00000394268 893 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 AC007064.3-201ENST00000422608 359 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 RPS27AP17-201ENST00000463344 455 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 RPL7AP28-201ENST00000464513 571 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 AC124068.1-201ENST00000563131 678 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 AC007066.2-202ENST00000566531 914 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 AC008966.2-201ENST00000606157 453 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 AC092653.1-201ENST00000608509 531 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 MIR492-201ENST00000638676 116 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 MIR921-201ENST00000401133 56 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 RPS27AP12-201ENST00000429552 465 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 ABCF2P2-201ENST00000450549 296 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 DDX39BP2-208ENST00000453923 258 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 SNORA31.9-201ENST00000516429 84 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 AL390334.1-201ENST00000556395 450 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 MIR4715-201ENST00000584117 79 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 VN1R85P-201ENST00000601587 426 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 AC005086.4-201ENST00000623065 213 ntBASIC4.22□□□□□ -1.73
CCDC88CQ9P219 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC88CQ9P219 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC88CQ9P219 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC88CQ9P219 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 RPL21P65-201ENST00000406094 466 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 VDAC1P9-201ENST00000412766 841 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC068587.1-201ENST00000483613 781 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 RPS4XP18-201ENST00000495480 763 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 MTND4LP2-201ENST00000502312 285 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AP001804.2-201ENST00000533932 910 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 MIR6867-201ENST00000610636 67 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AL133243.1-201ENST00000614487 366 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AL121890.2-201ENST00000617644 465 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC091046.3-201ENST00000631455 1574 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 PROS2P-201ENST00000474651 1951 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC073335.1-201ENST00000427776 363 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 PRELID3BP10-201ENST00000431957 584 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC090013.1-201ENST00000485147 480 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC091167.1-201ENST00000492017 396 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC015795.1-201ENST00000513669 327 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AC105233.3-201ENST00000531125 744 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 MIR3160-1-201ENST00000577972 85 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AP005119.2-201ENST00000579735 1105 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 AL049536.1-201ENST00000625043 744 ntBASIC4.21□□□□□ -1.74
CCDC88CQ9P219 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC88CQ9P219 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.2□□□□□ -1.74
CCDC88CQ9P219 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms