Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 AL512326.1-201ENST00000443050 721 ntBASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 AF213884.1-201ENST00000488102 463 ntBASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 AC008739.3-201ENST00000603262 127 ntBASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 Z98200.1-201ENST00000607298 470 ntBASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PHRF1Q9P1Y6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 AP000357.1-201ENST00000409926 1165 ntBASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 AC022336.1-201ENST00000475510 337 ntBASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 AC138832.1-201ENST00000522871 556 ntBASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 AC009852.2-201ENST00000567898 485 ntBASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 AC120057.2-201ENST00000571520 271 ntBASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.48
PHRF1Q9P1Y6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 OR11H4-201ENST00000315409 1082 ntBASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 RNU1-83P-201ENST00000363426 164 ntBASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 AC018644.1-201ENST00000429934 551 ntBASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 TBCAP1-201ENST00000436520 327 ntBASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 CYCSP43-201ENST00000438233 310 ntBASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 RNA5SP249-201ENST00000516127 99 ntBASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 OR4A2P-201ENST00000527276 913 ntBASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 AC234782.5-201ENST00000617723 324 ntBASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 AC091953.5-201ENST00000622919 233 ntBASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 AL356121.2-201ENST00000624715 780 ntBASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PHRF1Q9P1Y6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 OR56B2P-201ENST00000317102 954 ntBASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 RNU6-525P-201ENST00000363685 104 ntBASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 AL080315.1-201ENST00000406055 466 ntBASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 RN7SKP182-201ENST00000410772 298 ntBASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 AC008280.1-201ENST00000418851 412 ntBASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 ARL4AP4-201ENST00000434170 518 ntBASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 HMGB2P1-201ENST00000591146 634 ntBASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.76□□□□□ -1.49
PHRF1Q9P1Y6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms