Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC087894.1-201ENST00000538359 518 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 GCSHP4-201ENST00000538792 439 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC023824.3-201ENST00000569003 562 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 MIR4270-201ENST00000581799 70 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC069304.3-201ENST00000603938 1084 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AL450336.1-201ENST00000605180 586 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC008121.2-201ENST00000614647 523 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AL645927.2-201ENST00000618350 349 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AC013442.1-201ENST00000397347 228 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 ST13P16-201ENST00000401760 781 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 Z97832.1-201ENST00000402490 328 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AL592310.1-201ENST00000414330 671 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 MORF4L1P6-201ENST00000418771 268 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 RPS26P4-201ENST00000431743 355 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 RPL19P16-201ENST00000433839 588 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AC090018.1-201ENST00000434369 367 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AC020898.1-201ENST00000474167 787 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 OR9N1P-202ENST00000494289 481 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 OR51K1P-201ENST00000510214 950 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 IMPA1P1-201ENST00000510718 842 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AC145350.1-201ENST00000567426 208 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AP005262.1-201ENST00000582646 997 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 MIR4737-201ENST00000583979 81 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 GAS5-AS1-201ENST00000602767 694 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AL049844.2-201ENST00000604280 628 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AL161616.1-201ENST00000611867 286 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AC026585.1-201ENST00000619582 524 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 MIR6810-201ENST00000622701 70 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AP003476.1-201ENST00000623984 516 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AC079416.3-201ENST00000624479 549 ntBASIC5.24□□□□□ -1.57
EBF3Q9H4W6 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
EBF3Q9H4W6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 AL731566.1-201ENST00000620490 1937 ntBASIC5.23□□□□□ -1.57
EBF3Q9H4W6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 MIR192-201ENST00000384915 110 ntBASIC5.23□□□□□ -1.57
EBF3Q9H4W6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 OR51B3P-201ENST00000412287 913 ntBASIC5.23□□□□□ -1.57
EBF3Q9H4W6 AL590139.1-201ENST00000416267 400 ntBASIC5.23□□□□□ -1.57
EBF3Q9H4W6 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 AC245028.1-201ENST00000423259 256 ntBASIC5.23□□□□□ -1.57
EBF3Q9H4W6 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.23□□□□□ -1.57
EBF3Q9H4W6 BX323845.1-201ENST00000432417 179 ntBASIC5.23□□□□□ -1.57
EBF3Q9H4W6 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.23□□□□□ -1.57
EBF3Q9H4W6 MTND1P34-201ENST00000438556 671 ntBASIC5.23□□□□□ -1.57
EBF3Q9H4W6 EIF2S2P2-201ENST00000447161 982 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms