Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 IPMKP1-201ENST00000425988 855 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AC009784.1-201ENST00000426484 460 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AC244035.1-201ENST00000430042 390 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS11Q9H270 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS11Q9H270 AC000041.1-201ENST00000439655 175 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS11Q9H270 AL356121.1-201ENST00000442911 156 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 LINC02210-201ENST00000444561 288 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 CASP3P1-201ENST00000446037 609 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 OR52E3P-201ENST00000452083 936 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 HMGB1P4-201ENST00000455362 567 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AC008280.2-201ENST00000455473 307 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 RN7SL254P-201ENST00000460609 284 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS11Q9H270 BZW1P2-201ENST00000473537 826 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 RPL29P23-201ENST00000486188 442 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 RN7SL612P-201ENST00000497704 295 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AC026414.1-201ENST00000504046 698 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS11Q9H270 NACAP5-201ENST00000509863 636 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS11Q9H270 AC138832.1-201ENST00000522871 556 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS11Q9H270 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS11Q9H270 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS11Q9H270 AC137627.1-201ENST00000545761 289 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS11Q9H270 NBEAP1-201ENST00000554452 979 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS11Q9H270 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
VPS11Q9H270 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS11Q9H270 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 MIR4789-201ENST00000577469 82 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 VN1R90P-201ENST00000595717 726 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 AC005034.5-201ENST00000604219 466 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.76□□□□□ -1.49
VPS11Q9H270 uc_338.9-201ENST00000617424 182 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 MIR6813-201ENST00000621638 56 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 OR8A1-204ENST00000642111 1145 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS11Q9H270 AL360270.2-201ENST00000562952 5985 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS11Q9H270 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS11Q9H270 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 SEC63P2-201ENST00000503863 1939 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VPS11Q9H270 AC005005.4-201ENST00000623789 16698 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS11Q9H270 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS11Q9H270 AC093225.1-201ENST00000506867 1408 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AL353796.1-201ENST00000561542 3241 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS11Q9H270 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS11Q9H270 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS11Q9H270 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS11Q9H270 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VPS11Q9H270 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VPS11Q9H270 IGKV7-3-201ENST00000357453 298 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 RNU6-553P-201ENST00000364047 96 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS11Q9H270 Y_RNA.390-201ENST00000383932 102 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 SNORA70.6-201ENST00000383934 134 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 RNU6-932P-201ENST00000391108 106 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 ATP5F1P3-201ENST00000397213 657 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AL136310.1-201ENST00000404926 654 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 RNU2-16P-201ENST00000410712 136 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AL390774.1-201ENST00000411924 246 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS11Q9H270 MTCO1P19-201ENST00000443487 500 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS11Q9H270 CBX1P2-201ENST00000453841 458 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS11Q9H270 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS11Q9H270 SYPL1P1-201ENST00000473622 768 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms