Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNA5SP185-201ENST00000390963 114 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 PHBP1-201ENST00000392260 808 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC016769.3-201ENST00000396562 315 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 AL360182.1-201ENST00000397433 468 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 UBE2V1P2-201ENST00000397758 440 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC099535.1-201ENST00000408928 371 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 MED15P8-201ENST00000411601 545 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 AL133384.1-201ENST00000412744 351 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC009413.1-201ENST00000414823 399 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 ATG3P1-201ENST00000419507 911 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC048351.1-201ENST00000420064 602 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 RPSAP59-201ENST00000421048 890 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC007562.1-201ENST00000421819 517 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 TIMM9P1-201ENST00000436122 256 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 SUMO2P3-201ENST00000438311 288 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 RN7SL314P-201ENST00000490735 292 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 EIF3KP1-201ENST00000513279 656 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 IGHV7-40-201ENST00000520963 296 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 AL137100.2-201ENST00000555786 315 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 IGHV1OR15-4-201ENST00000560037 348 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 FRG2IP-201ENST00000563581 781 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 AL137190.1-201ENST00000603288 282 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 ATP1B3P1-201ENST00000605365 821 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 AL591167.1-201ENST00000607321 456 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 uc_338.9-201ENST00000617424 182 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC244100.1-202ENST00000621554 382 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC134981.1-201ENST00000628076 348 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 CASC19-284ENST00000642142 1868 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 AC122713.2-201ENST00000624942 3335 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 LINC02128-205ENST00000641755 1334 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 AC005592.1-201ENST00000566527 1640 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 AC022031.1-201ENST00000585985 2593 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 RNU6-593P-201ENST00000364716 112 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 SNORD116-11-201ENST00000383882 92 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 RNU1-11P-201ENST00000383975 164 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 RNU6-921P-201ENST00000384361 107 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 MED13P1-201ENST00000428342 171 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 OR7E116P-201ENST00000448529 957 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 AC005297.2-201ENST00000450430 606 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 AC004801.2-202ENST00000463559 283 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 AC092324.1-201ENST00000468671 324 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 UOX-201ENST00000471089 899 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 RN7SL416P-201ENST00000494042 298 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms