Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.52□□□□□ -1.53
SMOQ99835 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMOQ99835 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMOQ99835 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
SMOQ99835 AC104446.1-201ENST00000613728 1321 ntBASIC5.51□□□□□ -1.53
SMOQ99835 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMOQ99835 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMOQ99835 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.51□□□□□ -1.53
SMOQ99835 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMOQ99835 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMOQ99835 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 RNU4-7P-201ENST00000364758 141 ntBASIC5.51□□□□□ -1.53
SMOQ99835 MIR600-201ENST00000385007 98 ntBASIC5.51□□□□□ -1.53
SMOQ99835 MIR589-201ENST00000385238 99 ntBASIC5.51□□□□□ -1.53
SMOQ99835 MIR765-201ENST00000390226 114 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.51□□□□□ -1.53
SMOQ99835 ERHP2-201ENST00000402323 299 ntBASIC5.51□□□□□ -1.53
SMOQ99835 MIR1182-201ENST00000408363 97 ntBASIC5.51□□□□□ -1.53
SMOQ99835 RAP1BP1-201ENST00000412709 553 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.51□□□□□ -1.53
SMOQ99835 OR4K6P-201ENST00000416478 897 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.51□□□□□ -1.53
SMOQ99835 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.51□□□□□ -1.53
SMOQ99835 QRSL1P2-201ENST00000418582 964 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.51□□□□□ -1.53
SMOQ99835 USP9YP26-201ENST00000421008 661 ntBASIC5.51□□□□□ -1.53
SMOQ99835 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.51□□□□□ -1.53
SMOQ99835 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.51□□□□□ -1.53
SMOQ99835 NPM1P18-201ENST00000434232 732 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.51□□□□□ -1.53
SMOQ99835 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 PTMAP6-201ENST00000439110 327 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AC092170.1-201ENST00000440211 356 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.51□□□□□ -1.53
SMOQ99835 AC092647.2-201ENST00000452998 253 ntBASIC5.51□□□□□ -1.53
SMOQ99835 DNAJB5P1-201ENST00000454004 806 ntBASIC5.51□□□□□ -1.53
SMOQ99835 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 AP000797.2-201ENST00000475768 606 ntBASIC5.51□□□□□ -1.53
SMOQ99835 RN7SL808P-201ENST00000496066 299 ntBASIC5.51□□□□□ -1.53
SMOQ99835 RPS24P16-201ENST00000497294 392 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 RNU6-1004P-201ENST00000516584 111 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.51□□□□□ -1.53
SMOQ99835 AC092709.1-201ENST00000521355 1045 ntBASIC5.51□□□□□ -1.53
SMOQ99835 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.51□□□□□ -1.53
SMOQ99835 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.51□□□□□ -1.53
SMOQ99835 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.51□□□□□ -1.53
SMOQ99835 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 CYP2C60P-201ENST00000566088 139 ntBASIC5.51□□□□□ -1.53
SMOQ99835 MTCYBP28-201ENST00000566728 1132 ntBASIC5.51□□□□□ -1.53
SMOQ99835 ATP5F1P7-201ENST00000567330 760 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 SNORD39.2-201ENST00000579995 76 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AC006116.3-201ENST00000592968 361 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AL158042.1-201ENST00000605338 460 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AC018638.7-201ENST00000605836 1114 ntBASIC5.51□□□□□ -1.53
SMOQ99835 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMOQ99835 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMOQ99835 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 LINC01739-205ENST00000641890 573 ntBASIC5.51□□□□□ -1.53
SMOQ99835 MTCO1P7-201ENST00000419523 1542 ntBASIC5.51□□□□□ -1.53
SMOQ99835 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMOQ99835 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.51□□□□□ -1.53
SMOQ99835 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMOQ99835 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SMOQ99835 DDX18P5-201ENST00000534547 1306 ntBASIC5.5□□□□□ -1.53
SMOQ99835 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.5□□□□□ -1.53
SMOQ99835 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SMOQ99835 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SMOQ99835 AC073055.1-201ENST00000456901 1621 ntBASIC5.5□□□□□ -1.53
SMOQ99835 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SMOQ99835 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 RNU6-543P-201ENST00000362576 108 ntBASIC5.5□□□□□ -1.53
SMOQ99835 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 RNU4-31P-201ENST00000384211 141 ntBASIC5.5□□□□□ -1.53
SMOQ99835 RNU6-1263P-201ENST00000384601 106 ntBASIC5.5□□□□□ -1.53
SMOQ99835 RPS27AP11-201ENST00000402798 447 ntBASIC5.5□□□□□ -1.53
SMOQ99835 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SMOQ99835 AC013404.1-201ENST00000413068 249 ntBASIC5.5□□□□□ -1.53
SMOQ99835 MTND4P22-201ENST00000413116 1169 ntBASIC5.5□□□□□ -1.53
SMOQ99835 LUZP4P1-201ENST00000415420 344 ntBASIC5.5□□□□□ -1.53
SMOQ99835 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.5□□□□□ -1.53
SMOQ99835 PTP4A1P5-201ENST00000420305 455 ntBASIC5.5□□□□□ -1.53
SMOQ99835 RPF2P1-201ENST00000424137 906 ntBASIC5.5□□□□□ -1.53
SMOQ99835 MGAT2P2-201ENST00000427194 797 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms