Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AL121766.1-201ENST00000547436 487 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 VN1R82P-201ENST00000601481 356 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AP003117.2-201ENST00000606010 545 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 SAMMSON-209ENST00000641222 1100 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC008432.1-201ENST00000615912 1320 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 HSPD1P7-201ENST00000447985 1686 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 RNU6-797P-201ENST00000363101 109 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 Y_RNA.359-201ENST00000365498 102 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 RNU6-761P-201ENST00000384148 107 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 Y_RNA.560-201ENST00000384689 102 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC007068.1-201ENST00000396690 844 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 PEX12P1-201ENST00000400284 1048 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 MIR548F1-201ENST00000408667 84 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 RN7SKP229-201ENST00000410465 302 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AL390774.1-201ENST00000411924 246 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 MTND4P3-201ENST00000417829 541 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 RPL7P53-201ENST00000421245 739 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 HIGD1AP12-201ENST00000427832 281 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 MTND3P23-201ENST00000431980 347 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 OR2B8P-201ENST00000432841 938 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC012075.1-201ENST00000436549 580 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC019185.1-201ENST00000442718 389 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 OTX2P1-201ENST00000450956 354 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC104849.1-201ENST00000462623 405 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AL133445.1-201ENST00000467051 452 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 TRBV8-1-201ENST00000481590 279 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 EIF3LP3-201ENST00000495197 822 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC090638.1-201ENST00000498296 909 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC091965.2-201ENST00000512324 613 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC133963.2-201ENST00000513686 578 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC097486.1-201ENST00000515331 210 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 NDUFA5P2-201ENST00000519723 344 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 NDUFS5P6-201ENST00000529136 295 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 BLZF2P-201ENST00000553776 1130 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 OR11H3P-201ENST00000554547 982 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC012417.1-201ENST00000582307 1039 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 RN7SL622P-201ENST00000585292 275 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AL020997.3-201ENST00000602843 359 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AL606834.2-201ENST00000602954 668 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC090186.1-201ENST00000605991 572 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms