Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC234782.4-201ENST00000417646 1048 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 QRSL1P2-201ENST00000418582 964 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC008173.1-201ENST00000418901 264 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC073052.1-201ENST00000440417 714 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AL450023.3-201ENST00000440592 271 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 IFNWP4-201ENST00000453148 294 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 TRBV8-2-201ENST00000475637 270 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC090686.1-201ENST00000481577 749 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC093763.2-201ENST00000505334 1223 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC121161.1-201ENST00000510606 652 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC008562.1-201ENST00000521763 330 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 COX6B1P6-201ENST00000522347 255 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC022404.1-201ENST00000555320 273 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC090751.1-201ENST00000566966 267 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 CYCSP40-201ENST00000575927 294 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC090312.1-201ENST00000580637 348 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC124283.4-201ENST00000581815 456 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC109309.2-201ENST00000612597 332 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC007204.2-201ENST00000615022 616 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC005840.5-201ENST00000619166 599 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC095038.2-201ENST00000621464 1070 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC024595.1-201ENST00000623088 387 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC100871.1-201ENST00000507871 1456 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC022893.2-201ENST00000564832 3296 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 RNU6-543P-201ENST00000362576 108 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 RNA5SP27-201ENST00000363839 119 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AL031985.1-201ENST00000392713 418 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 LRRC37BP1-201ENST00000398851 714 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 NUDT19P3-201ENST00000404698 555 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC073136.2-201ENST00000417282 849 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 TMBIM7P-201ENST00000418074 855 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 EIF4A1P1-201ENST00000420241 934 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC093655.2-201ENST00000425735 631 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 RPS29P14-201ENST00000431518 171 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 YWHAQP9-201ENST00000445891 512 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC068135.1-201ENST00000446164 246 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 RPL31P15-201ENST00000449770 338 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AL035407.2-201ENST00000454090 378 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 RPS27AP2-201ENST00000457576 465 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 RPS17P2-201ENST00000461663 408 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 PGBD4P4-201ENST00000509673 613 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC012339.2-201ENST00000523996 453 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AP000916.1-201ENST00000533869 835 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC012254.4-201ENST00000588843 273 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC008521.2-201ENST00000591021 259 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AL158211.2-201ENST00000607282 395 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AC009704.2-201ENST00000618739 483 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 ATE1-AS1-202ENST00000636460 506 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms