Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNU6-1004P-201ENST00000516584 111 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AP000926.4-201ENST00000527351 454 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AC027544.3-201ENST00000535082 757 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 GCSHP4-201ENST00000538792 439 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 ATP5F1P7-201ENST00000567330 760 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AC110760.3-201ENST00000598794 467 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 SUGT1P3-202ENST00000604259 383 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AC104695.2-201ENST00000605056 775 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 MIR8080-201ENST00000622224 89 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AC109454.4-201ENST00000623411 649 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 CYP4F35P-202ENST00000636121 390 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 MIR1322-201ENST00000638013 71 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AC111188.2-201ENST00000529697 1387 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 U3.3-201ENST00000362986 216 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 RNU6-353P-201ENST00000364266 108 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 RNA5SP90-201ENST00000364801 99 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 RNU6-1263P-201ENST00000384601 106 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 RNU1-149P-201ENST00000390870 161 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 RN7SKP286-201ENST00000410894 299 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AL390774.1-201ENST00000411924 246 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 SDHDP6-201ENST00000414693 480 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 MORF4L1P6-201ENST00000418771 268 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC104333.2-201ENST00000422630 192 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 CYCSP6-201ENST00000434498 302 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 CYCSP24-201ENST00000445119 316 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AL161636.2-201ENST00000445179 927 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 MTND1P29-201ENST00000448112 647 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 MYO5BP2-201ENST00000449815 1277 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 RNU7-140P-201ENST00000459546 60 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC107015.1-201ENST00000466902 747 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 RN7SL547P-201ENST00000490793 290 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC097173.1-201ENST00000505862 819 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC138938.1-201ENST00000515431 782 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 RNU5A-4P-201ENST00000516588 111 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC095057.3-201ENST00000567102 1157 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AL354943.1-201ENST00000572103 781 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AP001269.3-201ENST00000588718 329 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC008521.2-201ENST00000591021 259 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC010620.1-201ENST00000601088 1102 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AL358072.1-201ENST00000604156 575 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 AC138965.3-201ENST00000623875 498 ntBASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms