Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 BRWD1P3-201ENST00000428816 390 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AL645931.1-201ENST00000439737 410 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 MTCYBP12-201ENST00000440559 1134 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 RPL34P20-201ENST00000442771 351 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC097484.1-201ENST00000471148 389 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 NIP7P2-201ENST00000485801 544 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 TPT1P8-201ENST00000510120 555 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 RNU6-415P-201ENST00000516252 97 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 RN7SKP260-201ENST00000516907 149 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 IGHV3-63-201ENST00000518422 341 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC018442.3-201ENST00000523025 183 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC004825.1-201ENST00000555068 586 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AL158050.2-201ENST00000605336 568 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC026741.1-201ENST00000605892 482 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC026979.4-201ENST00000606555 645 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC021851.1-201ENST00000608537 1082 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AP005229.2-201ENST00000609980 697 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC016769.4-201ENST00000616893 535 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC012414.7-202ENST00000622705 1090 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AL356118.1-201ENST00000635272 1078 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AL445984.1-201ENST00000637834 659 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AL590763.1-201ENST00000398297 1545 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC109780.1-201ENST00000451768 1344 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 AL158825.1-201ENST00000414735 521 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 MTND4P11-201ENST00000417020 1058 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 AL627308.1-201ENST00000435693 821 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 MTCYBP21-201ENST00000443300 1113 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 Z80107.2-201ENST00000445127 392 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 AL591363.1-201ENST00000450091 483 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 CYCSP20-201ENST00000473154 315 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 PPM1AP1-201ENST00000502740 1135 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 OR5M14P-201ENST00000506803 618 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 HIGD1AP14-201ENST00000507617 282 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 RNA5SP43-201ENST00000516559 110 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 RNU6-709P-201ENST00000517257 104 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 AC109635.6-201ENST00000525487 1113 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 GLRXP2-201ENST00000555594 321 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 AC079075.1-201ENST00000559543 878 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 MIR4760-201ENST00000585040 80 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 AC084373.1-201ENST00000603311 235 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 AL355816.2-201ENST00000610049 647 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 AC019206.1-201ENST00000621938 425 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 AC004808.1-201ENST00000627671 721 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC44A1Q8WWI5 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 NXF4-202ENST00000416098 1465 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC120338.1-201ENST00000625074 1541 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms