Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHD5Q8TDI0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.5□□□□□ -1.69
CHD5Q8TDI0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.5□□□□□ -1.69
CHD5Q8TDI0 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHD5Q8TDI0 AC126323.6-202ENST00000568092 3511 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AC017104.4-201ENST00000636283 1592 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 MIR383-201ENST00000362257 73 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AC011933.1-201ENST00000413334 321 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 SNRPFP1-201ENST00000414761 252 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AC116533.1-201ENST00000459748 321 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 RPS4XP18-201ENST00000495480 763 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AC108475.1-201ENST00000507880 950 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 RN7SKP46-201ENST00000515942 234 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AP002981.1-201ENST00000517692 975 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AL121890.2-201ENST00000617644 465 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AL121890.3-201ENST00000618494 516 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AC112198.2-201ENST00000426589 6996 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AC139769.1-204ENST00000472297 1931 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AL138820.1-201ENST00000617901 5305 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 ARAFP1-201ENST00000422172 605 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AL592293.2-201ENST00000422292 996 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 RPS26P2-201ENST00000440331 348 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 RPS27AP15-201ENST00000447672 466 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 HMGB1P19-201ENST00000517578 577 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.49□□□□□ -1.69
CHD5Q8TDI0 AC005086.4-201ENST00000623065 213 ntBASIC4.49□□□□□ -1.69
CHD5Q8TDI0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 RPL32P3-201ENST00000359025 275 ntBASIC4.48□□□□□ -1.69
CHD5Q8TDI0 MIR195-201ENST00000385194 87 ntBASIC4.48□□□□□ -1.69
CHD5Q8TDI0 VDAC2P1-201ENST00000399358 958 ntBASIC4.48□□□□□ -1.69
CHD5Q8TDI0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 COX6CP17-201ENST00000421389 185 ntBASIC4.48□□□□□ -1.69
CHD5Q8TDI0 AL591363.1-201ENST00000450091 483 ntBASIC4.48□□□□□ -1.69
CHD5Q8TDI0 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.48□□□□□ -1.69
CHD5Q8TDI0 PPIAP21-201ENST00000464473 501 ntBASIC4.48□□□□□ -1.69
CHD5Q8TDI0 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 MIR3939-201ENST00000582614 106 ntBASIC4.48□□□□□ -1.69
CHD5Q8TDI0 AL356218.2-201ENST00000605264 187 ntBASIC4.48□□□□□ -1.69
CHD5Q8TDI0 LINC00901.1-201ENST00000617252 152 ntBASIC4.48□□□□□ -1.69
CHD5Q8TDI0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.48□□□□□ -1.69
CHD5Q8TDI0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 AL133243.3-201ENST00000617415 3004 ntBASIC4.48□□□□□ -1.69
CHD5Q8TDI0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD5Q8TDI0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
CHD5Q8TDI0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD5Q8TDI0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.47□□□□□ -1.69
CHD5Q8TDI0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD5Q8TDI0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD5Q8TDI0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD5Q8TDI0 RNA5SP22-201ENST00000365393 109 ntBASIC4.47□□□□□ -1.69
CHD5Q8TDI0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD5Q8TDI0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD5Q8TDI0 AC092017.2-201ENST00000427600 362 ntBASIC4.47□□□□□ -1.69
CHD5Q8TDI0 PPIAP13-201ENST00000434706 478 ntBASIC4.47□□□□□ -1.69
CHD5Q8TDI0 AL672167.3-201ENST00000465951 960 ntBASIC4.47□□□□□ -1.69
CHD5Q8TDI0 STRADBP1-201ENST00000478954 1281 ntBASIC4.47□□□□□ -1.69
CHD5Q8TDI0 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.47□□□□□ -1.69
CHD5Q8TDI0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.47□□□□□ -1.69
CHD5Q8TDI0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms