Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TTC9CQ8N5M4 MFSD8-242ENST00000641690 4199 ntBASIC3.59□□□□□ -1.84
TTC9CQ8N5M4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.59□□□□□ -1.84
TTC9CQ8N5M4 MTND5P12-201ENST00000502851 1449 ntBASIC3.59□□□□□ -1.84
TTC9CQ8N5M4 AC010928.1-201ENST00000592477 1447 ntBASIC3.59□□□□□ -1.84
TTC9CQ8N5M4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
TTC9CQ8N5M4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
TTC9CQ8N5M4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.59□□□□□ -1.84
TTC9CQ8N5M4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
TTC9CQ8N5M4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TTC9CQ8N5M4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TTC9CQ8N5M4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.59□□□□□ -1.84
TTC9CQ8N5M4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TTC9CQ8N5M4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC011266.1-201ENST00000624119 3569 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC021146.4-201ENST00000309229 279 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 RNA5SP397-201ENST00000391323 118 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AL035419.1-201ENST00000397037 564 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 RNA5SP104-201ENST00000410989 118 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC004552.1-201ENST00000419089 348 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC007394.1-201ENST00000421941 531 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 SKP1P3-201ENST00000429280 487 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC006466.1-201ENST00000438721 289 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 YWHAZP2-201ENST00000440317 728 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AL162591.2-201ENST00000449634 317 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC010326.1-201ENST00000462726 602 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 RPS26P3-201ENST00000470205 348 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 RN7SL41P-201ENST00000476144 297 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC090543.2-201ENST00000483963 348 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC004057.1-201ENST00000485827 348 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 IGLV2-34-201ENST00000490007 283 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC105233.1-201ENST00000498840 781 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC025445.1-201ENST00000502728 300 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC018797.3-201ENST00000513388 1241 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC090819.1-201ENST00000523800 1111 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 OR5M2P-201ENST00000529003 936 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 MIR4270-201ENST00000581799 70 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 RN7SL690P-201ENST00000582087 240 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 AC068790.5-201ENST00000602741 355 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 USP9YP4-201ENST00000424401 1745 ntBASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
TTC9CQ8N5M4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 CPHL1P-201ENST00000461341 3407 ntBASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 RNU1-20P-201ENST00000363314 162 ntBASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 AC004448.2-201ENST00000422360 586 ntBASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 AL360081.1-201ENST00000428299 555 ntBASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 RN7SL817P-201ENST00000480777 288 ntBASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 AC012158.1-204ENST00000483430 465 ntBASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 RNA5SP154-201ENST00000516193 111 ntBASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 IGLVIV-53-201ENST00000520107 367 ntBASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 VTA1P2-201ENST00000520205 911 ntBASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 AC090151.1-201ENST00000520784 730 ntBASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.57□□□□□ -1.84
TTC9CQ8N5M4 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms