Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC004448.2-201ENST00000422360 586 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 CKS1BP6-201ENST00000424932 240 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 RNF19BPX-201ENST00000426224 625 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC104837.2-201ENST00000427236 424 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 BRWD1P3-201ENST00000428816 390 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AL513343.1-201ENST00000451818 792 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 RPS3AP53-201ENST00000454716 778 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 RPS3AP41-201ENST00000462701 778 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 RN7SL610P-201ENST00000463845 291 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 BRD9P1-201ENST00000529855 560 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 PCNPP1-201ENST00000552501 511 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 RN7SL802P-201ENST00000577858 299 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 MIR5699-201ENST00000578903 90 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC005084.1-201ENST00000605160 304 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 KATNBL1P1-201ENST00000605192 748 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 AL118556.2-201ENST00000614375 824 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 AC009032.1-201ENST00000617574 431 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SKA3Q8IX90 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SKA3Q8IX90 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SKA3Q8IX90 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SKA3Q8IX90 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.2□□□□□ -1.74
SKA3Q8IX90 CASC19-206ENST00000641028 1430 ntBASIC4.2□□□□□ -1.74
SKA3Q8IX90 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SKA3Q8IX90 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AC107027.3-201ENST00000565095 3473 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AC012020.1-201ENST00000624541 1728 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SKA3Q8IX90 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SKA3Q8IX90 SNORD65-201ENST00000391079 73 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SKA3Q8IX90 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SKA3Q8IX90 MTCYBP7-201ENST00000419540 1134 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 PDSS1P1-201ENST00000422953 1114 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 FABP7P1-201ENST00000424004 391 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 AL445528.1-201ENST00000426330 420 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 HMGB3P10-201ENST00000434734 572 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 AC004938.1-201ENST00000438468 308 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 RPS26P2-201ENST00000440331 348 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 OR1H1P-201ENST00000448731 937 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 RHEBP2-201ENST00000450289 600 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 OTX2P1-201ENST00000450956 354 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 RPS5P7-201ENST00000456664 608 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 CCDC75P1-201ENST00000469247 791 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 LARP7P4-201ENST00000481075 878 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 AC104971.1-201ENST00000495117 578 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AC091868.1-201ENST00000508746 304 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AP001880.2-201ENST00000538233 448 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 FKBP1BP1-201ENST00000553366 325 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AC026979.4-201ENST00000606555 645 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AC015804.1-201ENST00000622935 435 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 AL118508.4-201ENST00000624142 1176 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 AL356121.2-201ENST00000624715 780 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.19□□□□□ -1.74
SKA3Q8IX90 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AL133243.3-201ENST00000617415 3004 ntBASIC4.19□□□□□ -1.74
SKA3Q8IX90 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SKA3Q8IX90 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SKA3Q8IX90 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms