Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 TRIM51GP-201ENST00000534741 1350 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 RNU6-225P-201ENST00000384613 103 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AL035419.1-201ENST00000397037 564 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 RPL12P9-201ENST00000412942 488 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 RBMY2KP-201ENST00000418221 992 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 COX6CP13-201ENST00000428703 226 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AC004980.3-201ENST00000447046 365 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 TPT1P1-201ENST00000458495 518 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AC096571.1-202ENST00000506634 735 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AC021006.3-201ENST00000530771 192 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 CYB5AP5-201ENST00000549779 389 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AC010487.1-201ENST00000594408 1172 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AL031320.1-201ENST00000604177 357 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AL122125.1-201ENST00000616999 600 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AC024023.1-201ENST00000624530 922 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 AC006927.4-201ENST00000639187 543 ntBASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCN4BQ8IWT1 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AL132640.2-201ENST00000559968 1698 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 RN7SKP149-201ENST00000363008 344 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 RNU6-244P-201ENST00000391028 104 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 RPS3AP25-201ENST00000411660 793 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 LINC01347-201ENST00000417964 355 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 RPS27AP6-201ENST00000427962 448 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 FO393419.3-201ENST00000428741 282 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 RPL5P2-201ENST00000429598 854 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 YWHAZP2-201ENST00000440317 728 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AC097499.1-201ENST00000444277 208 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AL096803.2-201ENST00000450032 677 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 MRPS33P2-201ENST00000507850 322 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AC012339.2-201ENST00000523996 453 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AL109741.3-201ENST00000561748 592 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AC019322.1-201ENST00000571869 389 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 SS18L2P2-201ENST00000583960 235 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AC006116.5-201ENST00000591936 559 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AL022067.1-201ENST00000602426 454 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AC093673.2-201ENST00000609674 331 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AC108359.1-201ENST00000616451 1211 ntBASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms