Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 PPIAP9-201ENST00000403866 498 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC004074.1-201ENST00000421810 1063 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC115285.1-201ENST00000424879 736 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AL356981.1-201ENST00000454879 684 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC011005.3-201ENST00000491624 395 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 MRPS33P2-201ENST00000507850 322 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC006427.1-201ENST00000514359 712 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 SCARNA1-201ENST00000517138 166 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 SEPT10P1-201ENST00000517342 1162 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC079064.1-201ENST00000528365 362 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC025260.1-201ENST00000548858 430 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 YWHAZP1-201ENST00000556286 722 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC010735.1-201ENST00000567305 1026 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AL445984.1-201ENST00000637834 659 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC013437.2-201ENST00000639587 677 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AL022311.1-201ENST00000623726 19416 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 GTF2H2B-203ENST00000508065 1432 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC006484.1-201ENST00000435086 1884 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 SCARNA15-201ENST00000607520 4325 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 MAPK10-263ENST00000641052 4307 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC234772.1-201ENST00000377927 937 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 RN7SKP100-201ENST00000411258 284 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 GPS2P1-201ENST00000411761 986 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 TRGV6-201ENST00000417928 299 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC023128.2-201ENST00000420880 1223 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AL359265.2-201ENST00000434367 631 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 NDUFB4P8-201ENST00000435351 367 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC138832.1-201ENST00000522871 556 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 SULT1C2P2-201ENST00000562517 294 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC008507.2-201ENST00000588402 1176 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC011458.1-201ENST00000604034 617 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AP001521.2-201ENST00000608772 546 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC124016.2-201ENST00000610058 665 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC007275.1-201ENST00000621243 671 ntBASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HERC6Q8IVU3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.51□□□□□ -1.53
HERC6Q8IVU3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms