Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SCARNA15-201ENST00000607520 4325 ntBASIC2.98□□□□□ -1.93
CSMD3Q7Z407 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC2.98□□□□□ -1.93
CSMD3Q7Z407 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CSMD3Q7Z407 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CSMD3Q7Z407 SNORA5A-201ENST00000384111 134 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 ENSAP1-201ENST00000392855 326 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AL021997.2-201ENST00000615674 271 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 FP325313.1-201ENST00000638228 703 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AC024560.2-201ENST00000507981 1497 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 RNA5SP72-201ENST00000364442 117 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 CKS1BP6-201ENST00000424932 240 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AL159987.2-201ENST00000432754 307 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 RPS4XP15-201ENST00000489210 795 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AL592436.1-201ENST00000605135 558 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 CASC19-261ENST00000641853 1638 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 OR11H4-201ENST00000315409 1082 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AC233982.1-201ENST00000451247 436 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 CAB39P1-201ENST00000502277 460 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 RPL23AP94-201ENST00000512518 302 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 HMGN1P15-201ENST00000513870 295 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 SNORA70.24-201ENST00000517233 118 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 AC025175.1-201ENST00000606482 759 ntBASIC2.97□□□□□ -1.93
CSMD3Q7Z407 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC2.97□□□□□ -1.93
CSMD3Q7Z407 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CSMD3Q7Z407 OR6C71P-201ENST00000432580 913 ntBASIC2.96□□□□□ -1.93
CSMD3Q7Z407 AL935212.3-201ENST00000450729 284 ntBASIC2.96□□□□□ -1.93
CSMD3Q7Z407 RPL7P49-201ENST00000471402 708 ntBASIC2.96□□□□□ -1.93
CSMD3Q7Z407 AL358832.1-201ENST00000497800 389 ntBASIC2.96□□□□□ -1.93
CSMD3Q7Z407 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CSMD3Q7Z407 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC2.96□□□□□ -1.93
CSMD3Q7Z407 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC2.96□□□□□ -1.93
CSMD3Q7Z407 AC140113.4-201ENST00000622087 222 ntBASIC2.96□□□□□ -1.93
CSMD3Q7Z407 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CSMD3Q7Z407 GHR-202ENST00000357703 4316 ntTSL 5 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 GHR-213ENST00000622294 4312 ntTSL 5 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AC139769.1-204ENST00000472297 1931 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 USP9YP4-201ENST00000424401 1745 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AC010266.2-201ENST00000564741 3255 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AL137918.1-201ENST00000624542 1922 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 SNORA48.2-201ENST00000390926 124 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 EEF1A1P25-201ENST00000495704 1267 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 IGKV2D-19-201ENST00000523346 262 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AC105233.3-201ENST00000531125 744 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AL451086.1-201ENST00000605596 223 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 RNU1-20P-201ENST00000363314 162 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms