Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 RNU6-213P-201ENST00000384051 104 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 OR4K6P-201ENST00000416478 897 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 HNRNPA1P29-201ENST00000426409 879 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 AL139099.1-201ENST00000497398 403 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 RNU1-30P-201ENST00000606575 163 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 MFSD8-242ENST00000641690 4199 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 RNA5SP513-201ENST00000364648 118 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 OR5BE1P-201ENST00000425977 939 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 AL450472.3-201ENST00000615578 367 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 AL354798.1-201ENST00000622505 329 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 OR5BE1P-202ENST00000641168 1176 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13CQ709C8 RNA5SP22-201ENST00000365393 109 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 UBE2CP3-201ENST00000502715 450 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 AC097486.1-201ENST00000515331 210 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 YPEL5P3-201ENST00000547227 352 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 ERCC6-202ENST00000374127 1782 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 RNVU1-14-201ENST00000384770 164 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 AC104333.2-201ENST00000422630 192 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 PPIAP15-201ENST00000479662 484 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 AC110792.1-201ENST00000491826 472 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 AC026427.2-201ENST00000506228 536 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 ZFRP1-201ENST00000457579 2970 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 AL603766.1-201ENST00000407763 664 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 ATP1B1P1-201ENST00000509767 915 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 RN7SKP141-201ENST00000516167 338 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 AL160290.3-201ENST00000604869 165 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13CQ709C8 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS13CQ709C8 AC126323.6-202ENST00000568092 3511 ntBASIC3.42□□□□□ -1.86
VPS13CQ709C8 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 RNU4-6P-201ENST00000410804 122 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 TEX41-206ENST00000432608 661 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 AC092691.2-201ENST00000461787 803 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 RPL7P22-201ENST00000466005 733 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 AP000563.1-201ENST00000490865 758 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 SETP14-201ENST00000497538 873 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 RNU1-95P-201ENST00000516357 160 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 RNU1-128P-201ENST00000516704 160 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 AC244505.7-201ENST00000599675 272 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 AC114878.2-201ENST00000604863 1251 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms