Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
SNX30Q5VWJ9 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.29□□□□□ -1.56
SNX30Q5VWJ9 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SNX30Q5VWJ9 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.29□□□□□ -1.56
SNX30Q5VWJ9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX30Q5VWJ9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX30Q5VWJ9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX30Q5VWJ9 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX30Q5VWJ9 AL450345.1-202ENST00000605741 3881 ntBASIC5.29□□□□□ -1.56
SNX30Q5VWJ9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SNX30Q5VWJ9 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 MIR1271-201ENST00000408537 86 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 LINC01881-201ENST00000416103 412 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 CHEK2P3-201ENST00000416118 248 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 COX6CP13-201ENST00000428703 226 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 MTCO1P43-201ENST00000431831 488 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 RPS29P9-201ENST00000440360 171 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 IGHV5-78-201ENST00000450948 295 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 RNU6-1218P-201ENST00000458990 108 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 RPL32P14-201ENST00000463196 378 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC008379.1-201ENST00000463655 464 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC015908.1-201ENST00000478739 476 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 RN7SL346P-201ENST00000491561 294 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC010627.1-201ENST00000503819 1294 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 BRD9P1-201ENST00000529855 560 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC025260.1-201ENST00000548858 430 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 EDDM3DP-201ENST00000554692 434 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC106734.1-201ENST00000568646 663 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC233702.9-201ENST00000581528 203 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC116651.1-201ENST00000609724 556 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC253576.2-201ENST00000618815 580 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC095038.2-201ENST00000621464 1070 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AC103798.2-201ENST00000624292 632 ntBASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX30Q5VWJ9 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 AC103591.2-201ENST00000265259 766 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 IGKV7-3-201ENST00000357453 298 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 RN7SKP149-201ENST00000363008 344 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 NCSTNP1-201ENST00000406229 144 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 SNORA77-201ENST00000408716 125 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 VTA1P1-201ENST00000414044 866 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 AL158825.1-201ENST00000414735 521 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 PCNPP4-201ENST00000414817 517 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 AC008173.1-201ENST00000418901 264 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 OR2AM1P-201ENST00000422137 422 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 AC092013.1-201ENST00000438795 332 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 CYCSP24-201ENST00000445119 316 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 MTCO1P18-201ENST00000455518 1419 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 RPL35AP28-201ENST00000459730 331 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 RPS3AP41-201ENST00000462701 778 ntBASIC5.27□□□□□ -1.57
SNX30Q5VWJ9 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms