Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.35□□□□□ -1.39
PCDH1Q08174 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDH1Q08174 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH1Q08174 MIR4307-201ENST00000582802 84 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 AC097468.3-201ENST00000607956 456 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 AL136295.6-201ENST00000610486 658 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 AC135507.2-201ENST00000612443 309 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 MIR6070-201ENST00000613967 103 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 AC063952.1-203ENST00000634410 658 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 AL121936.2-201ENST00000641935 662 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH1Q08174 AL136531.3-201ENST00000624378 3658 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
PCDH1Q08174 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH1Q08174 AC005618.1-201ENST00000606901 3148 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
PCDH1Q08174 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH1Q08174 AC034229.2-201ENST00000566945 2508 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH1Q08174 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH1Q08174 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH1Q08174 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH1Q08174 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDH1Q08174 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 OR4G11P-202ENST00000642116 1414 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 RNF6P1-201ENST00000444889 1784 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AL355377.1-201ENST00000621125 1653 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 SNORD56.2-201ENST00000363242 71 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 SNORA51.12-201ENST00000384448 134 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 RNU6-316P-201ENST00000391027 107 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDH1Q08174 PEX12P1-201ENST00000400284 1048 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 HMGB3P20-201ENST00000417997 600 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDH1Q08174 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDH1Q08174 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDH1Q08174 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AC002486.1-201ENST00000435098 391 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AL451136.1-201ENST00000435399 325 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AC092106.2-201ENST00000436597 487 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 YWHAQP9-201ENST00000445891 512 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC079448.1-201ENST00000449377 373 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AC022080.2-201ENST00000452932 533 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC022364.2-201ENST00000457963 554 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH1Q08174 MEMO1P3-201ENST00000459811 302 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH1Q08174 IGKV2D-38-201ENST00000518423 240 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDH1Q08174 HIGD1AP6-201ENST00000521833 279 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDH1Q08174 OR5AN2P-201ENST00000534535 896 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDH1Q08174 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC089984.3-201ENST00000552838 363 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC090751.1-201ENST00000566966 267 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDH1Q08174 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH1Q08174 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDH1Q08174 RN7SL32P-201ENST00000580514 281 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDH1Q08174 RPL7AP69-201ENST00000595306 806 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH1Q08174 AL035413.2-201ENST00000604801 525 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 U1.34-201ENST00000618578 162 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AP001264.1-201ENST00000620602 703 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 AC005858.3-201ENST00000624756 589 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms