Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 VN2R3P-201ENST00000422626 1412 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 THAP12P8-201ENST00000447914 2115 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
H3F3AP84243 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
H3F3AP84243 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.04□□□□□ -1.76
H3F3AP84243 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
H3F3AP84243 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
H3F3AP84243 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
H3F3AP84243 RNA5SP505-201ENST00000364748 108 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 MIR129-1-201ENST00000384972 72 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 RNA5SP372-201ENST00000390836 115 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.04□□□□□ -1.76
H3F3AP84243 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.04□□□□□ -1.76
H3F3AP84243 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.04□□□□□ -1.76
H3F3AP84243 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.04□□□□□ -1.76
H3F3AP84243 AP001324.1-201ENST00000428553 399 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 RPL23AP1-201ENST00000428990 471 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.04□□□□□ -1.76
H3F3AP84243 RPL23AP65-201ENST00000475608 468 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 RPL23AP72-201ENST00000492447 435 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
H3F3AP84243 RPS4XP18-201ENST00000495480 763 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 HMGB3P13-201ENST00000511263 607 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
H3F3AP84243 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.04□□□□□ -1.76
H3F3AP84243 DYNLL1P4-201ENST00000549314 266 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.04□□□□□ -1.76
H3F3AP84243 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.04□□□□□ -1.76
H3F3AP84243 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.04□□□□□ -1.76
H3F3AP84243 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.04□□□□□ -1.76
H3F3AP84243 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.04□□□□□ -1.76
H3F3AP84243 AC008782.1-201ENST00000603386 430 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 BX323046.1-201ENST00000610145 535 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 SNX18P1Y-201ENST00000616231 511 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.04□□□□□ -1.76
H3F3AP84243 AC140113.4-201ENST00000622087 222 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 AC005086.4-201ENST00000623065 213 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.04□□□□□ -1.76
H3F3AP84243 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.04□□□□□ -1.76
H3F3AP84243 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
H3F3AP84243 OR56B2P-202ENST00000641377 2453 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 MAPK10-303ENST00000641324 3959 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
H3F3AP84243 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.04□□□□□ -1.76
H3F3AP84243 KPNA2P2-201ENST00000419546 1489 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 AL592148.3-201ENST00000608771 2646 ntBASIC4.04□□□□□ -1.76
H3F3AP84243 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
H3F3AP84243 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
H3F3AP84243 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
H3F3AP84243 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
H3F3AP84243 EOGT-210ENST00000615922 1931 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
H3F3AP84243 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.03□□□□□ -1.76
H3F3AP84243 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
H3F3AP84243 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
H3F3AP84243 OR10J6P-201ENST00000289731 930 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
H3F3AP84243 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
H3F3AP84243 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
H3F3AP84243 SEPT7P8-201ENST00000413308 775 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 AC016769.2-201ENST00000414815 475 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 AC062016.2-201ENST00000420950 676 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 AC006065.1-201ENST00000422539 802 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 NDUFA5P1-201ENST00000433858 341 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.03□□□□□ -1.76
H3F3AP84243 AC069285.2-201ENST00000440210 275 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 HMGB3P9-201ENST00000441799 583 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 AC012671.1-201ENST00000451912 203 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 RPL10P17-201ENST00000453852 316 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
H3F3AP84243 ATP5G1P3-201ENST00000463301 410 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
H3F3AP84243 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
H3F3AP84243 RN7SKP92-201ENST00000517266 244 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.03□□□□□ -1.76
H3F3AP84243 CYCSP28-201ENST00000534284 321 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 OR5AN2P-201ENST00000534535 896 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.03□□□□□ -1.76
H3F3AP84243 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.03□□□□□ -1.76
H3F3AP84243 AC090181.2-201ENST00000602975 672 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 AP002360.3-201ENST00000607673 710 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.03□□□□□ -1.76
H3F3AP84243 AP001002.1-201ENST00000625148 1513 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
H3F3AP84243 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
H3F3AP84243 AL672167.1-203ENST00000641299 2975 ntBASIC4.03□□□□□ -1.76
H3F3AP84243 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
H3F3AP84243 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
H3F3AP84243 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.03□□□□□ -1.77
H3F3AP84243 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
H3F3AP84243 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
H3F3AP84243 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.02□□□□□ -1.77
H3F3AP84243 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
H3F3AP84243 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.02□□□□□ -1.77
H3F3AP84243 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
H3F3AP84243 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.02□□□□□ -1.77
H3F3AP84243 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
H3F3AP84243 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
H3F3AP84243 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
H3F3AP84243 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms