Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HMGCS2P54868 AL359837.1-201ENST00000381357 287 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 RNU6-628P-201ENST00000410675 107 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 REREP1Y-201ENST00000422655 198 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGCS2P54868 COX6CP15-201ENST00000426313 211 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGCS2P54868 REREP2Y-201ENST00000439103 200 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 TDGF1P1-201ENST00000445734 527 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 RN7SL691P-201ENST00000494487 301 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 AC020593.1-201ENST00000507399 299 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.12□□□□□ -1.59
HMGCS2P54868 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGCS2P54868 RNA5SP497-201ENST00000516081 97 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGCS2P54868 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.12□□□□□ -1.59
HMGCS2P54868 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.12□□□□□ -1.59
HMGCS2P54868 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HMGCS2P54868 AC010547.7-201ENST00000570323 333 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCS2P54868 AC130352.1-201ENST00000602979 661 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 AC023762.1-201ENST00000603280 584 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCS2P54868 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCS2P54868 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGCS2P54868 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCS2P54868 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGCS2P54868 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCS2P54868 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGCS2P54868 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCS2P54868 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCS2P54868 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCS2P54868 AC006971.1-201ENST00000407916 4486 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS2P54868 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS2P54868 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HMGCS2P54868 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HMGCS2P54868 RN7SKP224-201ENST00000364140 325 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 RNA5SP283-201ENST00000365604 119 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 PPIAP31-201ENST00000405422 495 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGCS2P54868 EIF4A1P3-201ENST00000411521 244 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 RPS20P25-201ENST00000412447 352 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 AL445213.1-201ENST00000412589 747 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS2P54868 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCS2P54868 AC117434.1-201ENST00000419971 836 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 MFSD13B-201ENST00000420133 1290 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCS2P54868 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCS2P54868 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.11□□□□□ -1.59
HMGCS2P54868 RNA5SP49-201ENST00000516450 115 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 AC008676.3-201ENST00000521237 435 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCS2P54868 AC022784.5-201ENST00000522241 437 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 KCTD9P6-201ENST00000522306 950 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGCS2P54868 AC008126.1-201ENST00000549019 480 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HMGCS2P54868 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCS2P54868 MTATP6P25-201ENST00000574491 261 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 BNIP3P33-201ENST00000598912 569 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 LSM1P2-201ENST00000604911 322 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 MIR92B-201ENST00000607575 96 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 AC022960.2-201ENST00000616300 666 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 AL929601.4-201ENST00000613011 1341 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 AC092111.2-201ENST00000611627 1414 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HMGCS2P54868 AC100871.1-201ENST00000507871 1456 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 CR382285.2-201ENST00000624662 1495 ntBASIC5.11□□□□□ -1.59
HMGCS2P54868 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS2P54868 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS2P54868 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS2P54868 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS2P54868 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS2P54868 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS2P54868 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGCS2P54868 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS2P54868 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HMGCS2P54868 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.1□□□□□ -1.59
HMGCS2P54868 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
HMGCS2P54868 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS2P54868 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS2P54868 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS2P54868 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS2P54868 IQCB2P-201ENST00000401788 1633 ntBASIC5.1□□□□□ -1.59
HMGCS2P54868 FCF1P5-201ENST00000406490 482 ntBASIC5.1□□□□□ -1.59
HMGCS2P54868 CEACAMP8-201ENST00000413902 580 ntBASIC5.1□□□□□ -1.59
HMGCS2P54868 RAB9AP4-201ENST00000415230 609 ntBASIC5.1□□□□□ -1.59
HMGCS2P54868 MTCO1P7-201ENST00000419523 1542 ntBASIC5.1□□□□□ -1.59
HMGCS2P54868 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGCS2P54868 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.1□□□□□ -1.59
HMGCS2P54868 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGCS2P54868 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGCS2P54868 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.1□□□□□ -1.59
HMGCS2P54868 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
HMGCS2P54868 AC091544.1-201ENST00000484702 348 ntBASIC5.1□□□□□ -1.59
HMGCS2P54868 AC023424.1-201ENST00000496058 459 ntBASIC5.1□□□□□ -1.59
HMGCS2P54868 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS2P54868 ATP1B1P1-201ENST00000509767 915 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms