Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.77□□□□□ -1.33
USP11P51784 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.77□□□□□ -1.33
USP11P51784 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.76□□□□□ -1.33
USP11P51784 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
USP11P51784 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.76□□□□□ -1.33
USP11P51784 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
USP11P51784 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
USP11P51784 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.76□□□□□ -1.33
USP11P51784 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
USP11P51784 RNU6-707P-201ENST00000364647 95 ntBASIC6.76□□□□□ -1.33
USP11P51784 RNU1-59P-201ENST00000364829 162 ntBASIC6.76□□□□□ -1.33
USP11P51784 RN7SKP226-201ENST00000364912 300 ntBASIC6.76□□□□□ -1.33
USP11P51784 NRBF2P2-201ENST00000413087 861 ntBASIC6.76□□□□□ -1.33
USP11P51784 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.76□□□□□ -1.33
USP11P51784 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.76□□□□□ -1.33
USP11P51784 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.76□□□□□ -1.33
USP11P51784 RPS10P18-201ENST00000442662 495 ntBASIC6.76□□□□□ -1.33
USP11P51784 DDX39BP2-208ENST00000453923 258 ntBASIC6.76□□□□□ -1.33
USP11P51784 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.76□□□□□ -1.33
USP11P51784 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.76□□□□□ -1.33
USP11P51784 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.76□□□□□ -1.33
USP11P51784 AC109462.1-201ENST00000491087 368 ntBASIC6.76□□□□□ -1.33
USP11P51784 RPL9P6-201ENST00000492764 598 ntBASIC6.76□□□□□ -1.33
USP11P51784 AC069439.1-201ENST00000494739 167 ntBASIC6.76□□□□□ -1.33
USP11P51784 AC025459.1-201ENST00000504072 156 ntBASIC6.76□□□□□ -1.33
USP11P51784 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.76□□□□□ -1.33
USP11P51784 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.76□□□□□ -1.33
USP11P51784 ARL4AP2-201ENST00000507378 601 ntBASIC6.76□□□□□ -1.33
USP11P51784 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.76□□□□□ -1.33
USP11P51784 RN7SKP67-201ENST00000515905 235 ntBASIC6.76□□□□□ -1.33
USP11P51784 Y_RNA.667-201ENST00000516212 107 ntBASIC6.76□□□□□ -1.33
USP11P51784 AC060775.1-201ENST00000518241 520 ntBASIC6.76□□□□□ -1.33
USP11P51784 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.76□□□□□ -1.33
USP11P51784 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.76□□□□□ -1.33
USP11P51784 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.76□□□□□ -1.33
USP11P51784 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.76□□□□□ -1.33
USP11P51784 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.76□□□□□ -1.33
USP11P51784 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.76□□□□□ -1.33
USP11P51784 AC004825.1-201ENST00000555068 586 ntBASIC6.76□□□□□ -1.33
USP11P51784 AL138976.2-201ENST00000563989 694 ntBASIC6.76□□□□□ -1.33
USP11P51784 MTCO3P13-201ENST00000577757 781 ntBASIC6.76□□□□□ -1.33
USP11P51784 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.76□□□□□ -1.33
USP11P51784 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.76□□□□□ -1.33
USP11P51784 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.76□□□□□ -1.33
USP11P51784 AL022154.1-201ENST00000604698 785 ntBASIC6.76□□□□□ -1.33
USP11P51784 AL390208.1-201ENST00000605885 644 ntBASIC6.76□□□□□ -1.33
USP11P51784 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
USP11P51784 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.76□□□□□ -1.33
USP11P51784 uc_338.26-201ENST00000612659 160 ntBASIC6.76□□□□□ -1.33
USP11P51784 AL138960.1-201ENST00000613838 513 ntBASIC6.76□□□□□ -1.33
USP11P51784 U1.25-201ENST00000614085 162 ntBASIC6.76□□□□□ -1.33
USP11P51784 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.76□□□□□ -1.33
USP11P51784 U1.34-201ENST00000618578 162 ntBASIC6.76□□□□□ -1.33
USP11P51784 U1.31-201ENST00000620022 160 ntBASIC6.76□□□□□ -1.33
USP11P51784 AP002505.2-201ENST00000623585 696 ntBASIC6.76□□□□□ -1.33
USP11P51784 CR381653.2-201ENST00000624041 768 ntBASIC6.76□□□□□ -1.33
USP11P51784 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
USP11P51784 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.76□□□□□ -1.33
USP11P51784 MIR3688-2-201ENST00000636963 87 ntBASIC6.76□□□□□ -1.33
USP11P51784 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
USP11P51784 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
USP11P51784 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
USP11P51784 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
USP11P51784 GTF2IP4-201ENST00000453092 2054 ntBASIC6.76□□□□□ -1.33
USP11P51784 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
USP11P51784 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.76□□□□□ -1.33
USP11P51784 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
USP11P51784 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
USP11P51784 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.76□□□□□ -1.33
USP11P51784 CASC19-206ENST00000641028 1430 ntBASIC6.76□□□□□ -1.33
USP11P51784 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.76□□□□□ -1.33
USP11P51784 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.75□□□□□ -1.33
USP11P51784 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.75□□□□□ -1.33
USP11P51784 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
USP11P51784 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
USP11P51784 TEX21P-201ENST00000447107 1476 ntBASIC6.75□□□□□ -1.33
USP11P51784 SAMM50P1-201ENST00000455403 1399 ntBASIC6.75□□□□□ -1.33
USP11P51784 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.75□□□□□ -1.33
USP11P51784 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
USP11P51784 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
USP11P51784 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.75□□□□□ -1.33
USP11P51784 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.75□□□□□ -1.33
USP11P51784 TAF9BP1-201ENST00000396646 746 ntBASIC6.75□□□□□ -1.33
USP11P51784 AL354890.1-201ENST00000413730 346 ntBASIC6.75□□□□□ -1.33
USP11P51784 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
USP11P51784 RPS4XP5-201ENST00000419038 768 ntBASIC6.75□□□□□ -1.33
USP11P51784 GLRXP1-201ENST00000423261 334 ntBASIC6.75□□□□□ -1.33
USP11P51784 AC012498.1-201ENST00000424037 437 ntBASIC6.75□□□□□ -1.33
USP11P51784 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.75□□□□□ -1.33
USP11P51784 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.75□□□□□ -1.33
USP11P51784 AC079807.1-201ENST00000429993 481 ntBASIC6.75□□□□□ -1.33
USP11P51784 BTF3P10-201ENST00000433415 495 ntBASIC6.75□□□□□ -1.33
USP11P51784 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.75□□□□□ -1.33
USP11P51784 AC144530.1-201ENST00000452862 555 ntBASIC6.75□□□□□ -1.33
USP11P51784 AC016724.1-201ENST00000453215 421 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms