Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CASP4P49662 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CASP4P49662 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CASP4P49662 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CASP4P49662 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.88□□□□□ -1.63
CASP4P49662 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CASP4P49662 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CASP4P49662 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.87□□□□□ -1.63
CASP4P49662 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
CASP4P49662 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CASP4P49662 MIR192-201ENST00000384915 110 ntBASIC4.87□□□□□ -1.63
CASP4P49662 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.87□□□□□ -1.63
CASP4P49662 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.87□□□□□ -1.63
CASP4P49662 RPS27AP15-201ENST00000447672 466 ntBASIC4.87□□□□□ -1.63
CASP4P49662 MTND4LP12-201ENST00000448237 295 ntBASIC4.87□□□□□ -1.63
CASP4P49662 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CASP4P49662 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.87□□□□□ -1.63
CASP4P49662 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.87□□□□□ -1.63
CASP4P49662 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.87□□□□□ -1.63
CASP4P49662 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.87□□□□□ -1.63
CASP4P49662 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CASP4P49662 RPL12P25-202ENST00000598100 674 ntBASIC4.87□□□□□ -1.63
CASP4P49662 AC115286.1-201ENST00000604298 434 ntBASIC4.87□□□□□ -1.63
CASP4P49662 AC073342.3-201ENST00000624211 193 ntBASIC4.87□□□□□ -1.63
CASP4P49662 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CASP4P49662 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CASP4P49662 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.87□□□□□ -1.63
CASP4P49662 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CASP4P49662 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CASP4P49662 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CASP4P49662 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CASP4P49662 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CASP4P49662 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CASP4P49662 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.87□□□□□ -1.63
CASP4P49662 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.86□□□□□ -1.63
CASP4P49662 AL592148.3-201ENST00000608771 2646 ntBASIC4.86□□□□□ -1.63
CASP4P49662 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CASP4P49662 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CASP4P49662 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.86□□□□□ -1.63
CASP4P49662 VDAC1P9-201ENST00000412766 841 ntBASIC4.86□□□□□ -1.63
CASP4P49662 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.86□□□□□ -1.63
CASP4P49662 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CASP4P49662 NDUFA12P1-201ENST00000455914 406 ntBASIC4.86□□□□□ -1.63
CASP4P49662 RPS29P22-201ENST00000472363 168 ntBASIC4.86□□□□□ -1.63
CASP4P49662 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CASP4P49662 RN7SL459P-201ENST00000481078 302 ntBASIC4.86□□□□□ -1.63
CASP4P49662 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.86□□□□□ -1.63
CASP4P49662 NPM1P29-201ENST00000483112 803 ntBASIC4.86□□□□□ -1.63
CASP4P49662 RN7SL346P-201ENST00000491561 294 ntBASIC4.86□□□□□ -1.63
CASP4P49662 RN7SKP92-201ENST00000517266 244 ntBASIC4.86□□□□□ -1.63
CASP4P49662 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.86□□□□□ -1.63
CASP4P49662 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.86□□□□□ -1.63
CASP4P49662 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CASP4P49662 GSTP1P1-201ENST00000548078 319 ntBASIC4.86□□□□□ -1.63
CASP4P49662 MIR4675-201ENST00000577898 77 ntBASIC4.86□□□□□ -1.63
CASP4P49662 SLC25A36P1-201ENST00000590111 465 ntBASIC4.86□□□□□ -1.63
CASP4P49662 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.86□□□□□ -1.63
CASP4P49662 AC091979.2-201ENST00000607514 214 ntBASIC4.86□□□□□ -1.63
CASP4P49662 OR7M1P-201ENST00000608946 533 ntBASIC4.86□□□□□ -1.63
CASP4P49662 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.86□□□□□ -1.63
CASP4P49662 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CASP4P49662 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CASP4P49662 RLIMP2-201ENST00000427891 1563 ntBASIC4.86□□□□□ -1.63
CASP4P49662 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CASP4P49662 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CASP4P49662 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CASP4P49662 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CASP4P49662 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CASP4P49662 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CASP4P49662 AC062016.2-201ENST00000420950 676 ntBASIC4.85□□□□□ -1.63
CASP4P49662 AC004448.2-201ENST00000422360 586 ntBASIC4.85□□□□□ -1.63
CASP4P49662 CENPIP1-201ENST00000425713 902 ntBASIC4.85□□□□□ -1.63
CASP4P49662 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.85□□□□□ -1.63
CASP4P49662 UBE2V1P3-201ENST00000439651 417 ntBASIC4.85□□□□□ -1.63
CASP4P49662 AL138878.2-201ENST00000440581 1241 ntBASIC4.85□□□□□ -1.63
CASP4P49662 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.85□□□□□ -1.63
CASP4P49662 DDX39BP2-208ENST00000453923 258 ntBASIC4.85□□□□□ -1.63
CASP4P49662 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.85□□□□□ -1.63
CASP4P49662 RN7SL205P-201ENST00000490174 284 ntBASIC4.85□□□□□ -1.63
CASP4P49662 AC108022.1-201ENST00000493466 478 ntBASIC4.85□□□□□ -1.63
CASP4P49662 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.85□□□□□ -1.63
CASP4P49662 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.85□□□□□ -1.63
CASP4P49662 OR8G5-201ENST00000524943 1041 ntBASIC4.85□□□□□ -1.63
CASP4P49662 AP000827.1-201ENST00000527814 258 ntBASIC4.85□□□□□ -1.63
CASP4P49662 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.85□□□□□ -1.63
CASP4P49662 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.85□□□□□ -1.63
CASP4P49662 MIR4330-201ENST00000579077 105 ntBASIC4.85□□□□□ -1.63
CASP4P49662 RN7SL52P-201ENST00000584271 284 ntBASIC4.85□□□□□ -1.63
CASP4P49662 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.85□□□□□ -1.63
CASP4P49662 AP001160.4-201ENST00000596971 382 ntBASIC4.85□□□□□ -1.63
CASP4P49662 AC093765.1-201ENST00000603758 881 ntBASIC4.85□□□□□ -1.63
CASP4P49662 AC008745.1-201ENST00000604064 271 ntBASIC4.85□□□□□ -1.63
CASP4P49662 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.85□□□□□ -1.63
CASP4P49662 RN7SL722P-201ENST00000617780 284 ntBASIC4.85□□□□□ -1.63
CASP4P49662 RN7SL565P-201ENST00000618246 284 ntBASIC4.85□□□□□ -1.63
CASP4P49662 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.85□□□□□ -1.63
CASP4P49662 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.85□□□□□ -1.63
CASP4P49662 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.85□□□□□ -1.63
CASP4P49662 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CASP4P49662 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms