Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CYCSP38-201ENST00000559840 322 ntBASIC4.78□□□□□ -1.64
SOX2P48431 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
SOX2P48431 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX2P48431 MIR3154-201ENST00000577829 84 ntBASIC4.78□□□□□ -1.64
SOX2P48431 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.78□□□□□ -1.64
SOX2P48431 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX2P48431 AL031281.1-201ENST00000604049 488 ntBASIC4.78□□□□□ -1.64
SOX2P48431 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX2P48431 AL353726.1-201ENST00000614041 1000 ntBASIC4.78□□□□□ -1.64
SOX2P48431 AC025574.2-201ENST00000615621 514 ntBASIC4.78□□□□□ -1.64
SOX2P48431 AC091932.2-201ENST00000623014 291 ntBASIC4.78□□□□□ -1.64
SOX2P48431 AC092608.3-201ENST00000625017 386 ntBASIC4.78□□□□□ -1.64
SOX2P48431 AC068620.4-201ENST00000636730 1182 ntBASIC4.78□□□□□ -1.64
SOX2P48431 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX2P48431 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX2P48431 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX2P48431 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX2P48431 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX2P48431 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SOX2P48431 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX2P48431 SMG1P4-204ENST00000523028 4131 ntBASIC4.78□□□□□ -1.64
SOX2P48431 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
SOX2P48431 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SOX2P48431 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX2P48431 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 AC073136.1-201ENST00000449426 2884 ntBASIC4.77□□□□□ -1.65
SOX2P48431 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX2P48431 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SOX2P48431 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 AC016907.1-201ENST00000419483 435 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 FAM183DP-201ENST00000421987 399 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AC011233.1-201ENST00000422812 283 ntBASIC4.77□□□□□ -1.65
SOX2P48431 GTF2IP23-201ENST00000423746 351 ntBASIC4.77□□□□□ -1.65
SOX2P48431 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.77□□□□□ -1.65
SOX2P48431 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX2P48431 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.77□□□□□ -1.65
SOX2P48431 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 HMGB1P16-201ENST00000447155 540 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AC090804.1-201ENST00000448870 490 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AC073476.1-201ENST00000452854 407 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.77□□□□□ -1.65
SOX2P48431 AC245028.2-201ENST00000458673 253 ntBASIC4.77□□□□□ -1.65
SOX2P48431 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX2P48431 GAPDHP39-201ENST00000481866 979 ntBASIC4.77□□□□□ -1.65
SOX2P48431 RN7SL612P-201ENST00000497704 295 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.77□□□□□ -1.65
SOX2P48431 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.77□□□□□ -1.65
SOX2P48431 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 RNU6-416P-201ENST00000516265 103 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 AC138832.1-201ENST00000522871 556 ntBASIC4.77□□□□□ -1.65
SOX2P48431 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.77□□□□□ -1.65
SOX2P48431 AP001317.1-201ENST00000531194 960 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AP000619.3-201ENST00000535634 1127 ntBASIC4.77□□□□□ -1.65
SOX2P48431 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.77□□□□□ -1.65
SOX2P48431 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.77□□□□□ -1.65
SOX2P48431 ARGFXP2-201ENST00000579304 949 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AC022069.1-201ENST00000582910 658 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 PRPF19P1-201ENST00000584766 898 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 NBR2-204ENST00000587322 63 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 AL031601.1-201ENST00000605702 394 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AC122108.2-201ENST00000611946 526 ntBASIC4.77□□□□□ -1.65
SOX2P48431 MIR7973-1-201ENST00000614683 76 ntBASIC4.77□□□□□ -1.65
SOX2P48431 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX2P48431 AC092376.2-201ENST00000622621 4116 ntBASIC4.77□□□□□ -1.65
SOX2P48431 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 AL049737.1-201ENST00000413920 1403 ntBASIC4.77□□□□□ -1.65
SOX2P48431 AC106872.5-201ENST00000508856 1416 ntBASIC4.77□□□□□ -1.65
SOX2P48431 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX2P48431 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.77□□□□□ -1.65
SOX2P48431 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX2P48431 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX2P48431 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX2P48431 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.76□□□□□ -1.65
SOX2P48431 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 MAPK10-338ENST00000641647 3362 ntBASIC4.76□□□□□ -1.65
SOX2P48431 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.76□□□□□ -1.65
SOX2P48431 SSXP3-201ENST00000442971 1300 ntBASIC4.76□□□□□ -1.65
SOX2P48431 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms