Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC108161.1-201ENST00000461060 402 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AC058823.1-201ENST00000485315 474 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 PFN1P8-201ENST00000497012 543 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-1P43699 AC006427.1-201ENST00000514359 712 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 RNA5SP249-201ENST00000516127 99 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AC027308.1-201ENST00000517993 110 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX2-1P43699 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.24□□□□□ -1.73
NKX2-1P43699 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NKX2-1P43699 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-1P43699 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX2-1P43699 CYB5AP5-201ENST00000549779 389 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-1P43699 SETP1-201ENST00000556014 845 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX2-1P43699 AC090751.1-201ENST00000566966 267 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-1P43699 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-1P43699 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX2-1P43699 VN1R88P-201ENST00000596787 292 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-1P43699 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-1P43699 AL096712.1-201ENST00000614561 159 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 AC108359.1-201ENST00000616451 1211 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 MIR8069-1-201ENST00000616627 86 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 MIR6071-201ENST00000616741 78 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AC022079.2-201ENST00000619739 566 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AC008115.4-201ENST00000619780 775 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 MIR8069-2-201ENST00000621412 86 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AC116563.2-201ENST00000624751 535 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 CR392039.4-201ENST00000624968 501 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-1P43699 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-1P43699 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-1P43699 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-1P43699 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-1P43699 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 AC114786.1-201ENST00000512892 1415 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.23□□□□□ -1.73
NKX2-1P43699 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.23□□□□□ -1.73
NKX2-1P43699 MIR375-201ENST00000362103 64 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 RNU5B-1-201ENST00000363286 116 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 RNU4-2-201ENST00000365668 141 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NKX2-1P43699 SNORA51.12-201ENST00000384448 134 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 OR7E156P-201ENST00000400303 464 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
NKX2-1P43699 MIR1303-201ENST00000408625 86 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 RNU2-6P-201ENST00000411404 190 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 AC245060.4-201ENST00000413293 1121 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.23□□□□□ -1.73
NKX2-1P43699 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 AC012519.1-201ENST00000424588 610 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.23□□□□□ -1.73
NKX2-1P43699 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.23□□□□□ -1.73
NKX2-1P43699 DYNLL1P7-201ENST00000429273 258 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.23□□□□□ -1.73
NKX2-1P43699 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-1P43699 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-1P43699 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.23□□□□□ -1.73
NKX2-1P43699 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.23□□□□□ -1.73
NKX2-1P43699 AP006222.1-205ENST00000450734 457 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 CYCSP34-201ENST00000458172 304 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 AC091180.1-201ENST00000462104 372 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 AC011476.1-201ENST00000466725 307 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-1P43699 RN7SL346P-201ENST00000491561 294 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.23□□□□□ -1.73
NKX2-1P43699 AC114781.3-201ENST00000512083 142 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 PRELID3BP4-201ENST00000515476 571 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 RN7SKP99-201ENST00000517028 307 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.23□□□□□ -1.73
NKX2-1P43699 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.23□□□□□ -1.73
NKX2-1P43699 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.23□□□□□ -1.73
NKX2-1P43699 AL390726.5-202ENST00000564800 256 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 AC018552.3-201ENST00000567416 561 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.23□□□□□ -1.73
NKX2-1P43699 NTAN1P1-201ENST00000603150 646 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.23□□□□□ -1.73
NKX2-1P43699 AC108865.2-201ENST00000606881 432 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 AL118522.2-201ENST00000616045 615 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.23□□□□□ -1.73
NKX2-1P43699 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms