Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AC073869.10-201ENST00000642016 354 ntBASIC5.62□□□□□ -1.51
COPB2P35606 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPB2P35606 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COPB2P35606 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
COPB2P35606 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.62□□□□□ -1.51
COPB2P35606 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPB2P35606 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COPB2P35606 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPB2P35606 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COPB2P35606 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
COPB2P35606 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.61□□□□□ -1.51
COPB2P35606 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPB2P35606 SNORA73.1-201ENST00000363107 205 ntBASIC5.61□□□□□ -1.51
COPB2P35606 SNORA62-201ENST00000365493 153 ntBASIC5.61□□□□□ -1.51
COPB2P35606 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPB2P35606 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPB2P35606 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
COPB2P35606 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COPB2P35606 AL358178.1-201ENST00000407698 397 ntBASIC5.61□□□□□ -1.51
COPB2P35606 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.61□□□□□ -1.51
COPB2P35606 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.61□□□□□ -1.51
COPB2P35606 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.61□□□□□ -1.51
COPB2P35606 CNOT7P1-201ENST00000429006 852 ntBASIC5.61□□□□□ -1.51
COPB2P35606 NDUFA5P1-201ENST00000433858 341 ntBASIC5.61□□□□□ -1.51
COPB2P35606 AL031663.1-201ENST00000437445 219 ntBASIC5.61□□□□□ -1.51
COPB2P35606 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.61□□□□□ -1.51
COPB2P35606 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.61□□□□□ -1.51
COPB2P35606 PRPF38AP1-201ENST00000451976 933 ntBASIC5.61□□□□□ -1.51
COPB2P35606 RPL5P30-201ENST00000465511 891 ntBASIC5.61□□□□□ -1.51
COPB2P35606 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.61□□□□□ -1.51
COPB2P35606 RNU6-1004P-201ENST00000516584 111 ntBASIC5.61□□□□□ -1.51
COPB2P35606 Y_RNA.719-201ENST00000517156 106 ntBASIC5.61□□□□□ -1.51
COPB2P35606 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.61□□□□□ -1.51
COPB2P35606 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.61□□□□□ -1.51
COPB2P35606 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.61□□□□□ -1.51
COPB2P35606 AL049870.4-201ENST00000555741 486 ntBASIC5.61□□□□□ -1.51
COPB2P35606 AC233702.9-201ENST00000581528 203 ntBASIC5.61□□□□□ -1.51
COPB2P35606 VN1R84P-201ENST00000593697 235 ntBASIC5.61□□□□□ -1.51
COPB2P35606 AC012557.1-201ENST00000607115 611 ntBASIC5.61□□□□□ -1.51
COPB2P35606 AC010424.2-201ENST00000607594 443 ntBASIC5.61□□□□□ -1.51
COPB2P35606 AC243654.2-201ENST00000612843 443 ntBASIC5.61□□□□□ -1.51
COPB2P35606 MIR6853-201ENST00000619642 74 ntBASIC5.61□□□□□ -1.51
COPB2P35606 AC120338.1-201ENST00000625074 1541 ntBASIC5.61□□□□□ -1.51
COPB2P35606 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.61□□□□□ -1.51
COPB2P35606 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPB2P35606 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPB2P35606 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
COPB2P35606 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPB2P35606 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPB2P35606 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.6□□□□□ -1.51
COPB2P35606 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPB2P35606 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPB2P35606 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COPB2P35606 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.6□□□□□ -1.51
COPB2P35606 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPB2P35606 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPB2P35606 DHX40P1-201ENST00000588725 1412 ntBASIC5.6□□□□□ -1.51
COPB2P35606 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPB2P35606 GLULP6-201ENST00000399502 913 ntBASIC5.6□□□□□ -1.51
COPB2P35606 RPS27AP11-201ENST00000402798 447 ntBASIC5.6□□□□□ -1.51
COPB2P35606 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
COPB2P35606 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.6□□□□□ -1.51
COPB2P35606 AL512504.1-201ENST00000415494 778 ntBASIC5.6□□□□□ -1.51
COPB2P35606 AC009480.2-201ENST00000422916 432 ntBASIC5.6□□□□□ -1.51
COPB2P35606 C4BPAP2-201ENST00000428434 478 ntBASIC5.6□□□□□ -1.51
COPB2P35606 PPIAP13-201ENST00000434706 478 ntBASIC5.6□□□□□ -1.51
COPB2P35606 TPT1P12-201ENST00000448968 492 ntBASIC5.6□□□□□ -1.51
COPB2P35606 HMGB1P26-201ENST00000452520 628 ntBASIC5.6□□□□□ -1.51
COPB2P35606 snoU13.1-201ENST00000459157 104 ntBASIC5.6□□□□□ -1.51
COPB2P35606 OR52A4P-201ENST00000472867 958 ntBASIC5.6□□□□□ -1.51
COPB2P35606 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.6□□□□□ -1.51
COPB2P35606 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.6□□□□□ -1.51
COPB2P35606 NIFKP7-201ENST00000503365 834 ntBASIC5.6□□□□□ -1.51
COPB2P35606 AC016559.2-201ENST00000510759 359 ntBASIC5.6□□□□□ -1.51
COPB2P35606 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.6□□□□□ -1.51
COPB2P35606 RNU6-551P-201ENST00000516661 103 ntBASIC5.6□□□□□ -1.51
COPB2P35606 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.6□□□□□ -1.51
COPB2P35606 AC209154.1-201ENST00000582156 337 ntBASIC5.6□□□□□ -1.51
COPB2P35606 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.6□□□□□ -1.51
COPB2P35606 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.6□□□□□ -1.51
COPB2P35606 AL355816.1-201ENST00000607951 118 ntBASIC5.6□□□□□ -1.51
COPB2P35606 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.6□□□□□ -1.51
COPB2P35606 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
COPB2P35606 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
COPB2P35606 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COPB2P35606 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
COPB2P35606 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.6□□□□□ -1.51
COPB2P35606 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPB2P35606 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
COPB2P35606 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.6□□□□□ -1.51
COPB2P35606 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.59□□□□□ -1.51
COPB2P35606 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPB2P35606 AL592182.3-201ENST00000642132 3304 ntBASIC5.59□□□□□ -1.51
COPB2P35606 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
COPB2P35606 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
COPB2P35606 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.59□□□□□ -1.51
COPB2P35606 AC112198.2-201ENST00000426589 6996 ntBASIC5.59□□□□□ -1.51
COPB2P35606 MTCO1P8-201ENST00000416914 1523 ntBASIC5.59□□□□□ -1.51
COPB2P35606 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPB2P35606 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms