Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MIR3936-201ENST00000584304 110 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXD13P35453 ZNF92P3-201ENST00000596594 954 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXD13P35453 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXD13P35453 AL158211.2-201ENST00000607282 395 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 AL034370.1-201ENST00000397254 1590 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD13P35453 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXD13P35453 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD13P35453 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
HOXD13P35453 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
HOXD13P35453 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HOXD13P35453 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD13P35453 NCLP2-201ENST00000416078 1462 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD13P35453 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD13P35453 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXD13P35453 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD13P35453 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD13P35453 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD13P35453 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HOXD13P35453 AL590290.1-201ENST00000405336 380 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 COX6B1P1-201ENST00000415962 213 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD13P35453 VN1R37P-201ENST00000419096 748 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXD13P35453 PNRC2P1-201ENST00000423940 420 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 SEC63P1-201ENST00000425785 1258 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 AL451139.1-201ENST00000434718 346 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 DHX9P1-201ENST00000436565 3076 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 MED6P1-201ENST00000439659 713 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.27□□□□□ -1.57
HOXD13P35453 OTX2P1-201ENST00000450956 354 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 AC005229.2-201ENST00000456995 399 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXD13P35453 RWDD4P1-201ENST00000488019 565 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD13P35453 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD13P35453 MTCO2P9-201ENST00000503214 694 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC113192.3-201ENST00000529152 742 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD13P35453 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HOXD13P35453 UBTFL9-201ENST00000534504 1148 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC025260.1-201ENST00000548858 430 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD13P35453 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC105129.1-201ENST00000560250 297 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC011487.3-201ENST00000593607 453 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC211433.2-201ENST00000608433 387 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC016957.2-201ENST00000616998 848 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD13P35453 AC083865.1-201ENST00000636634 831 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 CASC19-206ENST00000641028 1430 ntBASIC5.27□□□□□ -1.57
HOXD13P35453 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD13P35453 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD13P35453 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD13P35453 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HOXD13P35453 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD13P35453 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD13P35453 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HOXD13P35453 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD13P35453 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HOXD13P35453 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD13P35453 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD13P35453 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HOXD13P35453 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HOXD13P35453 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HOXD13P35453 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
HOXD13P35453 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD13P35453 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HOXD13P35453 RNU6-317P-201ENST00000384031 107 ntBASIC5.26□□□□□ -1.57
HOXD13P35453 RSU1P3-201ENST00000412878 835 ntBASIC5.26□□□□□ -1.57
HOXD13P35453 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD13P35453 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD13P35453 AL606495.1-201ENST00000422100 813 ntBASIC5.26□□□□□ -1.57
HOXD13P35453 VN1R54P-201ENST00000435210 1049 ntBASIC5.26□□□□□ -1.57
HOXD13P35453 MOB1AP2-201ENST00000446060 614 ntBASIC5.26□□□□□ -1.57
HOXD13P35453 SLC25A18P1-201ENST00000449385 454 ntBASIC5.26□□□□□ -1.57
HOXD13P35453 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXD13P35453 RN7SL826P-201ENST00000479724 288 ntBASIC5.26□□□□□ -1.57
HOXD13P35453 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD13P35453 RN7SL205P-201ENST00000490174 284 ntBASIC5.26□□□□□ -1.57
HOXD13P35453 AC112518.2-201ENST00000508565 425 ntBASIC5.26□□□□□ -1.57
HOXD13P35453 AC091868.1-201ENST00000508746 304 ntBASIC5.26□□□□□ -1.57
HOXD13P35453 MTND1P36-201ENST00000522384 936 ntBASIC5.26□□□□□ -1.57
HOXD13P35453 OR8A2P-201ENST00000528631 952 ntBASIC5.26□□□□□ -1.57
HOXD13P35453 AP002812.4-201ENST00000532139 286 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms